KEGG   Ruditapes philippinarum (Manila clam): 132722147
Entry
132722147         CDS       T09557                                 
Name
(RefSeq) TNF receptor-associated factor 3-like
  KO
K03174  TNF receptor-associated factor 3
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    132722147
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF Sina_ZnF CCDC39 zf-C3HC4_2 AKAP9_C TRAF3_RING MIPOL1_C zf-RING_UBOX FPP DNA_repr_REX1B zf-C3HC4_4 Fez1 DUF5830 DUF3829_2nd NcaA_C CCDC22_CC Rod_CreS ZapB_rel LRS4 Seryl_tRNA_N DUF7006 DegS
Other DBs
NCBI-GeneID: 132722147
NCBI-ProteinID: XP_060562563
LinkDB
Position
Unknown
AA seq 554 aa
MCSDYSSIQSTPSGTPHFIRLEPRHCCHVCKNVLRDSMQTACGHRICKLCVGPLFDDKTE
PIPCPAGEEDCSDLFKSDITQDPSSRREIRDLLVSCDFVSFGCIDEIKWKALSNHVQTCK
YQPVTCPNSGCNKRIPPKEKNIHLKKYCEYKPEQCTFCKKFVPSKLMQSHIEDECTSVVM
PCPYQCGSPKMTRVELNNHKEICHMKPRECQYKCVGCTFMGTEEEVKNHLTSDLNGHIKL
TTDYAKRVGDQTVQCSRELQVVQSERDQLRAQVNNMNQEMTLMKNNFEKTMNLCKELKLK
MVSVTERVIHLEKQLENTAKKDIVERHDRDVRTMQTSLTQIRAQVVQLERLYLNEGRSGS
GEISSAPELKRRIDKHDSQFAQLDVQMAELDLRFQILETASYDGTLMWKLRDYARRKQDA
VQGRTLSLYSQPFYTHRYGYKMCARVYLNGDGMGKGSHMSLFFVVMRGEYDNLLPWPFQQ
KVTMTLLDQETGQCNLSDSFRPDPTSSRKPTTDMNIASGCPLFVSHTVLETAKYVRDDTI
VIMFQVDMLNVYHP
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgtgtagtgattactcatctattcagtcaactccttcgggaactccacattttattaga
ctagaacccaggcactgttgccatgtttgtaaaaatgttctccgggactcaatgcagaca
gcatgtggtcacagaatatgtaaactttgtgttggaccgttgtttgatgataaaacagaa
ccaataccgtgtccagctggtgaagaagattgttcagatttattcaaaagtgatataact
caagatccaagtagtcgccgagaaattagagacctcctcgtgtcatgtgactttgtgagc
tttggatgcatagatgaaataaaatggaaggcgttatctaatcatgttcagacttgcaag
tatcaaccagtcacatgtccaaatagtggctgcaataaaagaatacccccgaaagaaaag
aacattcatttaaagaagtattgtgagtataagcccgaacaatgcacgttttgtaaaaag
tttgttccttcaaagcttatgcagagccacatagaagatgaatgcacatctgttgtcatg
ccgtgtccctatcaatgcggtagcccaaaaatgacgagagttgagctgaataatcacaag
gaaatatgccacatgaagcctagagaatgtcagtataaatgtgttggctgtacgttcatg
ggtacagaggaagaggtaaaaaatcatttaaccagtgacttaaacggacatataaaatta
acaactgattatgctaaaagagtgggggatcaaaccgtgcaatgttcaagggaacttcag
gtagtacaatcagaaagagatcagcttcgtgcacaggttaataatatgaatcaagaaatg
acgctgatgaaaaacaattttgagaagactatgaatttatgtaaggaattaaagttaaaa
atggtatcagtaacagagcgtgtaattcatctggagaagcaactagaaaatactgctaag
aaagacattgttgaacgtcatgatagagatgtacgaaccatgcagacatctctgacacag
attagggcacaagttgttcaacttgaaagattatatttaaatgaaggaagatcaggctca
ggtgaaatctcatcagctccagagttaaagcgtagaatagacaagcatgacagccaattt
gcacagttagatgttcagatggcagaacttgacctgagatttcagatcctggagacagca
agctatgatggtacgctaatgtggaagttgagggactatgctcggagaaaacaagacgca
gttcaagggagaacactctcattgtacagtcagccattttacacccacagatatggttat
aagatgtgtgcaagggtatatcttaacggagatggtatgggaaaaggaagtcacatgagc
ctgttctttgttgttatgagaggtgagtatgataacctgttgccatggccgttccagcag
aaggtaacgatgacacttcttgaccaggagacaggacagtgcaacctttctgactcgttc
agaccagatccaacaagtagcagaaaaccaacaacagacatgaatattgcttcaggatgt
ccactatttgtatctcatactgtgttggaaacagcaaagtatgttagagatgacacaatc
gtgatcatgtttcaagttgatatgttaaatgtgtaccacccataa

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