Ruditapes philippinarum (Manila clam): 132722924
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Entry
132722924 CDS
T09557
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
rphi04145
Phagosome
rphi04814
Motor proteins
rphi04820
Cytoskeleton in muscle cells
rphi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132722924
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132722924
09142 Cell motility
04814 Motor proteins
132722924
04820 Cytoskeleton in muscle cells
132722924
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132722924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132722924
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132722924
03036 Chromosome and associated proteins [BR:
rphi03036
]
132722924
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132722924
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132722924
04147 Exosome [BR:
rphi04147
]
132722924
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132722924
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132722924
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
132722924
NuA4 complex
132722924
Chromatin remodeling factors
BAF complex
132722924
PBAF complex
132722924
GBAF(ncBAF) complex
132722924
SWR1 complex
132722924
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
132722924
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
132722924
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132722924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
132722924
NCBI-ProteinID:
XP_060563530
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MDDGDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAIIRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMFPGIADRMQKEITALSPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDEAGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggagatgttgctgctttggttgtagacaatggatctggtatgtgcaaggct
ggatttgccggcgacgacgccccgagagctgtgtttccttcgattgttggcagacctagg
catcagggtgtgatggttggtatgggacaaaaagacagctatgtcggcgatgaagcacag
agcaagagaggaattcttactttgaaatacccaattgaacacggtattgtcaccaactgg
gacgatatggagaaaatctggcatcataccttttacaatgaactccgtgttgcaccagag
gaacatcccgttcttctcactgaagcccctctaaaccctaaggcaaacagagaaaagatg
acccaaatcatgtttgagaccttcaattcaccagccatgtatgttgctatccaggctgtt
ctgtcactgtacgcttccggtcgtaccactggtattgtgatggactctggagatggagta
tcgcacactgtacctatctatgaaggttacgcacttccccacgccatcattcgattagat
ctggccggaagagatcttacggactatcttatgaaaattcttacagagcgtggatactct
ttcacgacaacagctgaaagagaaatcgttagagatattaaagaaaaattatgttatgtt
gctctcgactttgaacaggaaatgcaaactgctgcctcatctagcagtcttgaaaagagc
tacgaactccccgacggtcaagtcatcaccattggcaacgaacgtttccggtgtccagaa
gctatgttccagccatctttccttggtatggaatccgcaggtatccacgaaactacatac
aacagcattatgaagtgtgacgttgacatccgtaaagatctttatgccaacaccgtgttg
tccggtggttcaactatgttcccaggaattgccgaccgtatgcagaaagaaatcactgct
ttgtctccaccaacgatgaagatcaaaatcattgccccaccagagaggaaatactctgta
tggatcggcggttctattttagcctcactttcaactttccaacagatgtggatcagcaaa
caggaatacgacgaagctgggccgtccattgtacacagaaaatgtttctaa
DBGET
integrated database retrieval system