KEGG   Ruditapes philippinarum (Manila clam): 132726520
Entry
132726520         CDS       T09557                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123-like
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132726520
Enzymes [BR:rphi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132726520
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132726520
  Multi subunit type E3
   KPC complex
    132726520
SSDB
Motif
Pfam: TPR_RNF123 SPRY zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 DUF7201
Other DBs
NCBI-GeneID: 132726520
NCBI-ProteinID: XP_060567835
LinkDB
Position
Unknown
AA seq 1225 aa
MSKTASQASRPCSKAEHVQLLSVSKTSDSFAADVISKVFPSAELASEASADAGSKVVTVS
NLGSHLEKWTEDAVKGQQITDTSEPVEGRLGPVDVTFQFDIHTNVGTLIVDQDRLGLSSQ
SNFSSMKANCCVYRGKWAYEVMLGSKGVMQIGWCTIKCKFSQEEGVGDTEDSYAYDGSRQ
RKWNKTTQKYGEAWCTGDVITCTIDCDTGSICFYRNGKSLGEAFSCVRLGPGYAYFPAVS
LSLGESLRANFGATPLRYPVPGYSPLQSSPVTDVVKTNILLSYIEKLLKIHMEVVEVPKS
PDKEMLSKEKKPAPLTETRSKESSVLLIVAQVFDKLAPYLRNTYVTEACLLKLVLRLNDV
TMATSHQPIISKLLDYMWAFMQGFEVRGCVENLMVSLLSSYRYTPTTTDFRNNRQYLILV
LAVLRHQQTRRYLLEHELFDKVKFPMFLHIKPLDDAGLQQLSPTVWWDMTSQDDEPDETV
SEEEQRNKDLYTQSVDVLRERIEEIEQIQVELLKVLLNHRDLADGKTSRQLFLEKFRKFI
RENKPNSLTLWPMPVTLCFFHRMVQALRYYWDDFQKEDPARFVFSSEAFMPIQEFWSDSR
DSYDVQRCGGSMSHLNRMLGFEVNKAQGLQLCQDGEVKPLEKSKSASIEYPSTEMPSGNT
LMELLDGVMMLYHIAAHKQLGKMNVLKEHIQEYIQSYKDTLKKLDCCPIEMDDVRDELIR
AKSVFLEKITEQARQICWVRAVIYSKQKQLDVAWLLKSALKTVSKASEYKLLFQYMPEFY
LDIVIYSHNALKNFFHPYMLFESLPDYDELIKGFATFLVSHFADSRIVVTDTRDNIIQAL
ACFTCYEKSLKVLESLPVEKCQHMLKALISPYENRSWAQTNWILVRIWKGCGFGFRYTHL
PHLVPSKVQLTEFGSASLQKPCPSPKFQSLLGDILRSEPEAATRFIDTLLNQLNWSFSEF
IGMMQEIQTIISRTERKIFIESRQLKICGTCFEISVCLFRVVEMVVAIAPTLFTDWTKPS
AELLMHRLIQLVCLVLNRITQKDGMFDSVVSLYITGLESVTHYPMLSVIAGILTMLIVNA
DTECQELVTNVLLADHGFQITALEFMLNNHDDKEKGAVGGVKPLKEKQFDFRNYEEVNEE
EIGNVETLISHLRDKQSTFVRQDSEIKDEDLCQICYARKETTGFKPCGHQSCRSCINHQM
LIKKECFFCKAVITSIEDLQSTTKV
NT seq 3678 nt   +upstreamnt  +downstreamnt
atgtcaaaaactgcatcacaggcatctaggccttgtagtaaagctgaacatgttcagtta
ctgtcggtctcaaaaacatctgactcatttgcggcagatgttatttcaaaggtatttcca
tcagcagaattggcatcagaagcgagtgcggatgctgggagtaaagttgtaactgttagc
aaccttggcagtcatcttgaaaaatggactgaagatgcagttaaaggccagcaaataaca
gacacctcagaaccggttgaaggtcggcttggtccagttgatgtcactttccagtttgac
attcacaccaatgttggaacattaattgttgatcaagacagattggggttgtcaagccag
agtaattttagcagtatgaaggcaaactgttgtgtatatagaggaaaatgggcgtatgaa
gtaatgcttggatcaaagggtgtaatgcagataggctggtgtaccataaaatgcaagttc
tcacaagaagaaggtgttggagatactgaggattcctacgcctatgatggtagcaggcag
agaaaatggaacaaaacaacacagaaatatggagaggcatggtgtacgggagatgtgata
acgtgtacaattgactgtgatacaggttctatatgcttttacagaaatggtaagagttta
ggggaagcattttcgtgtgtaagacttggaccaggatatgcctacttcccagctgttagt
ttatcactgggagaaagtcttagagccaattttggtgctacacctttgagatatccagtg
ccaggctactctccccttcaaagctcacctgttactgatgttgtgaaaaccaacatatta
ctatcctacatagagaaactgctgaaaattcacatggaagtggttgaggttcctaaatca
cctgacaaggaaatgttatcaaaggagaaaaagcccgccccacttacagaaacaagaagt
aaagaaagttccgtactgctgattgttgcccaagtctttgataaacttgcaccttacttg
agaaatacatacgttacagaagcttgcttgttaaagcttgtacttagactgaatgatgtc
accatggcaacaagtcatcagccaatcatatccaagcttctagactacatgtgggctttc
atgcagggatttgaggtccgaggttgtgtggagaacttaatggtatcactcctgtcttca
tacagatataccccaacaactacagactttagaaacaataggcagtatttgatattagtt
ctggctgtattgagacatcaacagacaagaagatatctcctagaacatgagttatttgac
aaggtcaagtttccaatgtttctacacataaaacctctagatgatgcaggattacagcaa
ctttcaccaacagtttggtgggacatgacctctcaggatgatgagccagatgagacagta
tctgaggaagaacagagaaataaagatctttacacacaatctgttgatgttttaagagaa
aggattgaagagatagaacaaattcaagtagaattattaaaagttcttctgaatcacaga
gatctggctgatggtaaaacttcaagacagttattccttgaaaagtttagaaagtttatc
agggagaataagccgaattctctgacactttggccaatgcctgtaacgttatgtttcttc
catcgtatggtacaagcactaagatattactgggatgacttccagaaagaagatccagca
agatttgtcttcagttctgaggcatttatgccaatacaagagttctggtctgacagtagg
gattcctatgatgtacaacgttgtggaggatcaatgtcacaccttaatagaatgctagga
tttgaagtgaacaaagctcagggattgcagttatgtcaagatggggaggtcaaaccttta
gaaaaatccaaatcagccagcattgagtatccttctacagaaatgccaagtggtaataca
ttaatggaattactagatggtgtaatgatgttgtatcatatagcagcacataaacaacta
ggcaagatgaatgtgttaaaagaacatatacaggagtatattcagtcttataaagatact
ctgaaaaagttggattgttgtcctatagagatggatgatgtaagagatgagttaataaga
gcaaagtctgtgttcctagagaagataactgaacaggcgagacagatctgctgggtgaga
gctgtcatttattccaagcaaaagcagttagatgttgcctggttactgaagtctgcatta
aagactgtgagtaaagcatcggagtataaactactgttccagtatatgccggaattctac
ctggatattgtcatatattcccataatgccttgaagaacttctttcatccctacatgttg
tttgaatcactgccagattatgatgagttgatcaaagggtttgctacatttctagtcagt
cattttgccgactcaaggattgttgtaactgataccagggataacataatacaagcactc
gcatgttttacctgttatgaaaaatcactgaaagtgttagaaagtttaccagttgaaaag
tgtcagcacatgttgaaagccctgatatctccatatgaaaacaggtcatgggctcaaacc
aactggattctagtccgtatttggaaggggtgtgggttcggttttcgatacactcacttg
ccacatttagtcccatctaaagtacaacttacagaatttggttcagcaagtttacagaag
ccatgtccatcaccgaagttccagagtttgttaggtgatattttacgttctgagccggag
gcggctacaaggtttatagatacacttctcaaccaattaaactggtcgttctcagagttt
attggaatgatgcaagaaatacagacaattatatcaagaacagaaaggaagatatttata
gagagccgccagctcaagatctgtgggacttgttttgagatttctgtatgtctgttcagg
gttgttgagatggtggttgccatagcacccactctcttcactgattggacaaaaccatct
gctgaactattaatgcacaggttaattcagcttgtatgtctagtgttaaacagaattact
cagaaggatggaatgtttgatagtgttgtctcattatatattacaggtttggagagtgtc
acacattatcccatgctgtctgttattgcaggcattcttaccatgcttatagtcaatgct
gatactgaatgtcaggagttggtaaccaatgtattattggcagatcatggtttccagatt
actgcccttgaatttatgctaaataatcatgatgataaagagaagggagccgtggggggt
gtaaaaccattgaaggagaaacagttcgattttagaaattatgaagaagttaatgaagaa
gagataggaaatgtggaaactttgatctcccacctacgtgataaacagtccacgtttgta
cggcaagatagtgaaatcaaggatgaagacttgtgccaaatatgttatgctagaaaggag
acaacaggttttaaaccatgcggacatcagtcctgcaggtcatgtataaaccaccaaatg
ttgatcaagaaagaatgtttcttctgtaaagcagttattacatcaattgaagatctccag
tcaaccaccaaagtctaa

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