KEGG   Ruditapes philippinarum (Manila clam): 132729012
Entry
132729012         CDS       T09557                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi00900  Terpenoid backbone biosynthesis
rphi01100  Metabolic pathways
Module
rphi_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    132729012
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rphi01006]
    132729012
Enzymes [BR:rphi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     132729012
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     132729012
    2.5.1.29  geranylgeranyl diphosphate synthase
     132729012
Prenyltransferases [BR:rphi01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   132729012
SSDB
Motif
Pfam: polyprenyl_synt Terpene_syn_C_2
Other DBs
NCBI-GeneID: 132729012
NCBI-ProteinID: XP_060570728
LinkDB
Position
Unknown
AA seq 311 aa
MIFERCVTWKVTNTILDSMDATEKILLDPYLYICQIPGKQIRGKLALAFNHWLRIPDDTL
HVIGEATQMLHNASLIIDDIEDNSNLRRGIPVAHNIYGVAHTINSANYVYFLGLQKVLTL
QHPDATRVFTEQILELHRGQGMDIYWRDTVNCPTEEEYTTMVIRKTGGLFGLAVRLMQLF
SDNKHDFKPLLDNLGLYFQVRDDYANLISKEYEANKSYCEDLTEGKFSFPLIHGILCDQG
DKQIISILRRRTKDNDVKKYCVDLLHKKGSFDYTKEKLIQLEQKIYEQIDECGGNQHLKG
LIDELKKIYRS
NT seq 936 nt   +upstreamnt  +downstreamnt
atgatatttgaaaggtgtgtgacttggaaggtaacaaatacaattttagacagcatggat
gctactgaaaagatattattggatccatatttgtatatatgtcaaatacctggtaaacag
ataagggggaaattagcattggcatttaatcattggttgaggataccagatgatacacta
catgtgataggggaggcaactcagatgttacataatgcaagtttgattatagatgatatt
gaagataattctaatttaagaagaggaattccagtggctcacaacatttatggtgtagca
catacaataaactcagctaactatgtctacttccttggtctacaaaaagttctgacatta
caacaccctgatgctacaagagtttttacagagcagatactagagttacatcgtgggcag
ggtatggatatatactggagagatactgtcaactgtccaacagaggaagaatatacaact
atggtgattagaaaaactgggggtctgtttggattggctgttagactcatgcagttattc
agtgacaataaacatgacttcaaaccactattggataatttaggactgtattttcaagtg
agggatgattatgcaaatcttatttcaaaggagtatgaggccaataaaagttattgtgag
gaccttacagaagggaaattttcattcccactaatccatggtatattatgtgaccaggga
gataaacagataataagtatactacgacgaagaacaaaagataatgatgtgaaaaaatac
tgtgtagatttacttcacaaaaaaggttcatttgattacaccaaggaaaaattaatacag
ctagaacaaaaaatatatgaacagatagacgagtgtggaggaaatcaacatttgaaggga
ctcattgatgaattgaagaaaatctacagatcttga

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