KEGG   Ruditapes philippinarum (Manila clam): 132729208
Entry
132729208         CDS       T09557                                 
Name
(RefSeq) TNF receptor-associated factor 6-like
  KO
K03174  TNF receptor-associated factor 3
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    132729208
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 TRAF3_RING U-box zf-Nse zf-C3HC4_3 zf-RING_5 zf-rbx1 RING_XB3-XBAT31 zf-TRAF_2 zf-ANAPC11 Sina_ZnF zf-RING_4 PsbP
Other DBs
NCBI-GeneID: 132729208
NCBI-ProteinID: XP_060570906
LinkDB
Position
Unknown
AA seq 775 aa
MANQGGRASYPHLPPNTGQDGTGPTGSNPSLTTNPNQQSVHMSRSAPLGSGSITNPPVGL
TNLSTTGGASILSGSLYLPSNSQATESGSGHVASRSLPLGPNTSWPLRGIPGGNASLLPN
TGVSSAPNTGLFQNTTAGSRDSSCSNSSNSSGGCDYGQIFENEEGWDLVFVPQRSEKYDC
PICLLVLREPMQTECGHRFCRACILKWLRESEARCPVDNQSLDERQLFPDNFAKREILAL
TVKCPNHTKGCDQTTVLKHLQIHLENCVFSLTPCPNECANILLRGRLSEHLLNQCPKRMI
KCSLCQSEHVAEKQQEHLSDCPEAIIDCPSCQLQLKRHLLVQHRNTECKKSSTKCQYSML
GCPYEGERQTLEDHEKSTLIYHMSLINLSIIRLFTVLRINPQNLQSMQKPSSLGYNGTEG
ACNSGASSYPSYFVNPKDSMNLLQHLLQQLQLTPSDLNNVNVSDANICQSLPTSGSNVEN
VQAGSMNVLYASPGSVSIATAQNLGVPISQAQASGQNTDEEQNDSERNNTNQTQYQMFSY
TSEPSNRQDNKEIPQMSVNENQLFTMKCQNDIQDESLARHDQQLLDLSHQKDYHEKVIRE
LKGKVKYLESTVNEMEGRCGNGVYVWKIKNFLKLRREAERGEITAIHSASFYSSYYGYKL
CIRVNPNGVDSAKGTHLSLFIHFMQGEYDDLLEWPFSGRIVLTIIDQNPMCEMRNHISET
LMSKPNLAAFQRPVSTRNHKGFGYMEFLPLSVIDGSTYIKNDTLIIKANVIPSSL
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggcgaatcaaggtggccgtgcctcatacccacatctacctccaaatacgggtcaggat
ggaaccggtccaaccggttctaatccttcactgacaactaatcctaaccagcaaagtgtt
catatgtcaagatctgctccacttggtagtggtagcattaccaatcctccagttggcttg
actaacttatcgaccactgggggtgcatcaattttgtccggaagtctttatttaccaagt
aacagtcaagcaacagagtccggtagtggtcatgtagcaagtagaagtctaccactgggg
ccaaatacttcatggcctttaagaggcatacctggagggaatgcttcattgttgccaaac
actggagtgtcgtctgctccaaacactggactgtttcagaatacaactgctggtagccgt
gacagtagctgtagcaacagtagtaacagcagtggaggttgtgattacgggcagatcttc
gaaaatgaagaagggtgggatctagtgtttgtaccccagcgctcagagaaatatgactgt
cctatatgtttacttgtcttgcgagaacccatgcagactgaatgtggacatcgattttgc
cgtgcttgtattcttaaatggctcagggaatcagaggcaagatgtcccgtggataatcag
tctcttgacgagcggcaattattcccggataattttgcgaaaagagaaatcctggcgtta
actgtgaaatgtcccaatcatacaaagggctgtgatcagactactgttcttaaacactta
cagatccatttagaaaattgtgtattctcattaactccttgtcccaatgaatgtgccaac
atattattacgtggtcgattatcagaacatcttcttaaccaatgtccaaagagaatgatc
aagtgctccctttgccaatcagaacatgttgcagaaaaacagcaggagcacctgtctgac
tgtcctgaagctataatagactgtccttcctgccagcttcaactgaagagacacctgctg
gtgcaacatcgtaatacagaatgtaaaaaatcgtcaacaaagtgtcagtactctatgcta
ggatgtccgtacgagggtgagagacagactctagaggatcacgagaaatccacccttata
tatcacatgtcactgattaatcttagcatcatccgactcttcaccgtgctacgtatcaac
cctcagaacctccagtcaatgcagaaaccctcttcacttggttacaatggaacggaaggg
gcatgcaattcgggcgcgtcaagttatccgtcatatttcgtaaatcctaaagacagtatg
aatttattgcaacatcttcttcaacaacttcagctgacaccttctgatttaaataatgtt
aatgtaagcgatgcaaatatttgtcagagtttacctacatcaggaagtaatgtcgagaat
gtacaagcaggcagtatgaatgtattgtacgctagtccaggaagtgtgtccatagcaact
gcacaaaatcttggcgtacctatcagtcaggcgcaggcgagtggacaaaacacggatgag
gaacaaaatgacagtgagagaaataacactaaccagacacagtatcagatgtttagttac
acttcagagccatcaaatagacaggacaataaagaaatccctcagatgtccgtaaatgag
aatcagctttttacgatgaaatgtcaaaatgacatacaggatgaaagtttagcccgacat
gatcagcaattattggatttatcgcatcagaaagattatcatgaaaaagttatccgagaa
ctgaaagggaaagtgaagtatttagaaagtactgtaaatgaaatggagggtcgctgtggg
aatggagtttatgtttggaaaataaaaaatttcttgaaattaagacgtgaggcagaaaga
ggtgaaattactgcaatacatagtgcttcattttattcaagttattatggttataaactt
tgtattagagttaatccaaatggagtagacagtgcaaaaggtacacacctctctttattt
attcattttatgcagggggagtatgacgatttactggaatggccatttagtggaaggata
gttcttacaataattgatcaaaatcccatgtgcgaaatgcgcaatcatatctctgaaaca
ctaatgtctaaaccgaacttggcagcatttcagcgtccagttagtactagaaatcataaa
ggcttcgggtacatggagtttttaccactaagtgtaatcgatggatctacgtacataaaa
aatgatactcttataattaaagccaatgtcataccatccagcctatag

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