KEGG   Ruditapes philippinarum (Manila clam): 132733527
Entry
132733527         CDS       T09557                                 
Name
(RefSeq) F-box/WD repeat-containing protein 2-like
  KO
K10261  F-box and WD-40 domain protein 2
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132733527
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     132733527
SSDB
Motif
Pfam: WD40 WD40_Prp19 EIF3I WD40_CDC20-Fz F-box-like Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_SCAP WDR55 F-box Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 PQQ_2 CARME F-box_4 DUF1513 Vta1_C
Other DBs
NCBI-GeneID: 132733527
NCBI-ProteinID: XP_060576169
LinkDB
Position
Unknown
AA seq 510 aa
MSHGRIMKMSHSRSPSDPGPPKMLPGMEVPMASYNDSEKQFLIWLHSVSVKFLGLTDTKR
ICFLDSIISLCGSKELTYLTELLPNLVYRDFLRMLPTEVSVRILMMLDEKSLLNCCLVSK
YWNHLINSFREVWIHMAKRVGAKILAEPYVPIHKYKNLFIHSTYLVQQMKNRSAFEVMTL
EGHMGRVMALTQGRDLVATGSDDHTVRFWDIHSGECVKVIHTHSVSALQFDDIFVYTASY
DNTAVCWDIDTGQLMWRYVGHISAVFSLDARRDLNLLVTGSADKTVKVWQLDSGILLNSL
SDWHNDWITHVKILSCSPRQDGAEIDILQGRTLQLVSVDRQGCCFWTISNNENIDVSVTH
TADWCINVPSDRQNSGISVCTWNKKDRCQSISIYKTETIDNKCVPRHIKSLSLPTDLPSK
QTVLGIGQKFAVFMVDEGYSRVVIVDTHSCRIMCSIPVPPYRPTQNGSSATLGNQDWLDG
FTEGNRTGLFLALCLKDNNIMLLKWKDHLT
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcacatggaagaataatgaaaatgtcccacagtagatcaccttctgatccaggacca
cctaaaatgttaccaggaatggaagttcctatggcatcatataatgattcagagaaacag
tttctgatttggttacactcagtcagtgtgaagtttctgggattaactgacacaaagagg
atatgcttcctggattcaataatcagtctttgtggatcaaaggagttaacttacttgaca
gagttactgccaaatttagtgtatcgtgacttcctacgaatgctaccaacagaagtgagc
gtgcggatcttgatgatgttagatgagaagagcttgttgaattgttgtcttgtgtcaaaa
tactggaatcatctgataaacagttttagggaggtttggattcacatggctaagagagtt
ggtgccaaaatactcgctgagccttatgtcccaatacacaaatacaaaaatctgttcata
cattccacttatcttgtacagcagatgaaaaataggtcagcttttgaggtcatgaccttg
gaaggtcacatgggtagggtcatggcactaacacaaggccgtgacctagttgctacaggt
tctgatgaccacacagtgagattctgggatattcactcaggagaatgtgtcaaggtcata
cacacacatagtgtttcagcactacagtttgatgacatatttgtatacacagcatcttat
gataacactgctgtatgctgggatattgacacaggtcagctaatgtggcgttatgtcggg
catatctcggcagtttttagtctggatgcaagaagagacttgaacttgttggttaccggc
tcggctgacaagactgttaaagtgtggcaacttgactcagggattttattgaactcatta
tcagactggcataatgattggattactcatgtaaaaattctgtcctgctccccacgtcaa
gatggtgcggaaatagatatattacaaggacggactttacagctggtgtcagttgacaga
cagggctgttgtttttggacgatatcaaataacgagaatatagacgttagtgtaacacac
acagctgattggtgtattaatgtgccttcagacagacaaaactctggaataagtgtttgt
acctggaacaagaaggacagatgtcagtctatatctatatataaaacagaaactatagat
aataagtgtgtaccacgacacataaagtcactgagtttgccgaccgacttgccatcaaaa
cagactgtgttagggattggacagaagtttgcagtattcatggtagatgaaggttacagt
cgagtggtgattgtagatacacattcgtgtagaataatgtgttcaatcccagtaccacca
tataggcccacccagaatggttcatcagcaacattaggcaatcaagattggcttgatggg
tttacagaaggcaacagaactggactgttcctagcactttgtctcaaagataacaatatc
atgcttctaaagtggaaagaccacctgacatga

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