Ruditapes philippinarum (Manila clam): 132733605
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Entry
132733605 CDS
T09557
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
rphi04145
Phagosome
rphi04814
Motor proteins
rphi04820
Cytoskeleton in muscle cells
rphi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132733605
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132733605
09142 Cell motility
04814 Motor proteins
132733605
04820 Cytoskeleton in muscle cells
132733605
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132733605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132733605
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132733605
03036 Chromosome and associated proteins [BR:
rphi03036
]
132733605
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132733605
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132733605
04147 Exosome [BR:
rphi04147
]
132733605
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132733605
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132733605
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
132733605
NuA4 complex
132733605
Chromatin remodeling factors
BAF complex
132733605
PBAF complex
132733605
GBAF(ncBAF) complex
132733605
SWR1 complex
132733605
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
132733605
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
132733605
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132733605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Motif
Other DBs
NCBI-GeneID:
132733605
NCBI-ProteinID:
XP_060576248
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MSFNYAQDDDIPAVVIDNGSHLCKAGFAGDDAPRSIIPPLIGRPRYMYENWMVGMDGKDA
FIGDEIQNKRDVLAINQPIKKGIITDWDDMEKIWQYIFDKELHVSPEHHPVLLTDVPLNP
KINREKMCEIMFETFNTPLFSVSLAGVLGMYSSGNFSAITLDVGHEVSHVIAIYEGYILK
HAIDRMNFGGNDLTDYLLQMLNGERSHSLTCNSDKEIVRKMKESLGYTELDFEKTMNCTE
SSIENIYELPDGRRLTVGNERFRCTEPLFQPHLLGKDFPGLHQFLYSSLMKCDIDTRRDI
MRNVILSGGCTMFTGLRERMVKELTDLVPKTMKVKVIAPPERKLSVWIGGSVLASLSMFQ
NLAISKLDYEENGTRIVHLKCT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaattacgcgcaagatgatgacattcccgcggttgtcattgacaacggttca
cacctctgtaaggcggggtttgcaggagacgatgctccaagatccataattccgcctctt
attggcagaccgcggtacatgtacgaaaactggatggtaggcatggatggaaaagacgcg
ttcattggagacgaaatacaaaataaaagagatgtacttgcaattaatcaaccaatcaaa
aagggtatcataaccgactgggatgacatggagaaaatatggcaatatatatttgataaa
gaactgcacgtgtcacctgagcaccatcctgtgttacttacagatgtcccattaaatcct
aaaatcaacagagaaaaaatgtgcgaaataatgtttgaaacgttcaacacgccactattt
tctgtttcattagcgggtgtcctcgggatgtactcctcaggcaacttttcggctattaca
cttgatgtaggtcacgaggtctcccacgtgattgcaatatatgaaggatatatattaaaa
cacgcgattgatcgtatgaattttggtggtaatgatttgacggactacttgttacaaatg
ttaaatggcgaacgaagccattctttaacttgcaatagcgacaaagaaatagttcgtaag
atgaaagaatcattaggttacacagaacttgattttgagaaaacaatgaattgtaccgag
tctagtatcgaaaatatatatgagctacctgatggacgtaggcttacagttgggaacgaa
aggttccggtgtacagagccactttttcaaccacatttactcggcaaagatttcccagga
ttacatcagttcttatattctagtcttatgaaatgtgatattgacaccaggagggatata
atgcgtaacgtgatattatcaggcggatgtacgatgttcacagggctgagggaaagaatg
gttaaggaattgacggatttggttccaaaaacgatgaaggtgaaggttatagcaccccct
gaaagaaagctaagtgtctggattggaggttcagttctagcttctttatctatgttccaa
aatctcgccatttcaaaactggattatgaggaaaatggcaccagaattgtgcatttaaaa
tgtacatga
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integrated database retrieval system