Ruditapes philippinarum (Manila clam): 132734910
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Entry
132734910 CDS
T09557
Name
(RefSeq) transient receptor potential cation channel subfamily M member-like 2 isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132734910
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
132734910
Ion channels [BR:
rphi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132734910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
EMC3_TMCO1
LDcluster4
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
132734910
NCBI-ProteinID:
XP_060577765
LinkDB
All DBs
Position
Unknown
AA seq
1987 aa
AA seq
DB search
MSSENDEVIQDSVDVGNKMNKMDRQSEQTVGTSNDAGGRRHFVEDVTSDTSPLLGASIDS
EESWIKLDSDLKREREDATEQVDIEVEDISLNNIHMNTFPGLEQSLEDQIIDQSNNNVED
ISNSKSFYNEKSDRPHTYRMDSNQNHARSNVEDSKLIEKTSAVVEEKKYDIEITNIEPSL
ISECDSDVKEEEVLKVDALDGEEIVCMSRRERVSIGDYHYIRMNAFPLTKHDAVSSLDSV
SSDEVDGEVFEDTTKENCSALGEPNSVEKQEKYKRDKKRAVRFLASYWSRDSLEAVDMID
ADFNGNNEDDEVDMDIVPKVNIRTDRSQSVVKKHASVLGELKSQVKAVKQEQLQKEKDAR
RRFGNVLKELKAYSLELDEETKWIRGHIKRRECSSFIPPANTPEEERRKVNCQCGYAYNK
HIPNADKKHLEDEKWAYKKHSIQKTTNAFGDIEFVGYGGNVGKYIRVDVDTKMSDMLDLM
MQVWGLDKPNLLISVTGGAKNFQMNKRLKETFRRGLMKTALTTGAWIVTGGTHAGVMKHV
GEAVKDFGVASTSKNPVISIGIAPWGCIQNKEVLIDDQCTGLWPANYRIEKEQKPKESFL
DPNHTHFILVDNATEHKFAVEIPFRARLENKIAKIRTDTGDNAVSVPIVLLVLEGGPGTL
ETVHQAIQNNTPSVIVKGSGRAADILAYAYQNSKEEEIEATDQEGKKQKKARRFMDDSLL
VEVKEMVEKEFKNDVDTHVGRIKDCLEKCDLMSVFELDNKSGVKEIDVAMLQALLKANKN
QVFDQLRLALAWNRIDVAKSDIFTDDKRWPTGSLDDVMFSAIQLNRVDFIELFLDHGVSL
REFLTKKRLLLLYNKISSNCLLRTLLDRVKHKEDSHRKNFSLLDVGILIQSLMGDSFRPI
YTTKPEYAYLDVDLLLDGLTTKKAKEGGISAFKAMTELAMNPASNQDDVDGRANQKHQSN
SDFENPSQELFIWSVLMIRQGMAKLFWAEGKDAIAAALVANSILQAMRNKTDDTEVVLKI
QHDIDEWSELAVGVLSECYSTDEKKAQDLLVREQTNWGDTTCMLIAVKADNKVFISQTAC
QSLLNSIWMGKLAQDNSSWKLVLCVLCPPLALVLLNFQKKQVEKPNNQLQNQLYELDNNK
KDDVDKKLVRRQTTFMKSNLKGSRTSLRVGEESKDQTENDEQEQKKMLGVRERIYYFFNA
PVIIFMNNVLSYLVFLGLFTYVLIFDFNPNVTTAEIILMIWVFTIFSEEVRQISRDILSQ
NRRQVATTASNSLAAKLQSYITDTWNIVDIITIVLFIIGMVLRFLPHSTTFEAARVFLAL
NFVSFFLRLLHIFSVHKELGPKLVMIGRMVQDLMYFLVILMVFVVSYAIASHSILFPNSP
LRWYTIVDVIRKSYWNIYGELFLEEIEGTADCSYDEVMWLNGTLPRCPTDTGKIVVPILM
GVYMLLANVLLLNLLIAMFSYTFTLVQDNTDKHWFFQRYSLIYEYYTRPVLCPPLIFFSH
VYLLVKFLFSCCCCQKSTSNNDNEDDFRRKFKNERELVQWENVIADAFHQKTELKDFESM
EYKVNDTNTLIKELTSRIDELQEQQLQLSLSDNVSQSQSHLTPITPVSPSSVIVKMPPKL
EFRLEALEKSMEMTHDSLKWIMNSLKEGKVASDTSVPPTFIDWEEQRLEGERKSKKKKKR
KLEIKAGEERAKVREMLLRGINCHFRSRTSPYPGSLISRFPVPDDKVSWEAEYPEYSPSA
YTAPELVQDLRPEWADIDIFQLTPQQREAAITSFNAVDGEKQVDRMSFLGEYVVQNGLPL
NPKGRTGLQSRGLLGRWGPNHAGDPVVTRWKKNADGSKVLKEGKPVLEFVAVLRADNQMW
ALPGAILPPGAKPADHLQADFTDEAMGSLEGSSNEKVVRKKMNKIWKKGVKIYEGYADDP
RNTDNAWIETTAISYHDEDGAAFSQCNLRAGERAELVTWLTGSHKVTLHGSHLYLVKLAA
ERLGAYF
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaaaatgatgaagtgattcaggatagtgtagatgttggcaacaaaatgaat
aagatggacagacagtctgaacaaacagtaggcaccagcaatgatgctggtggacggagg
cattttgtggaagatgtaacttctgatacctcacctctcctaggagccagtattgatagc
gaagaaagttggataaagctcgatagtgatcttaaaagagagcgtgaagacgccactgag
caagtagacatagaagttgaagacataagcctaaataacattcatatgaatacattccct
ggtttggaacaaagcttggaagaccaaattatagatcagtctaacaataacgttgaagat
ataagtaacagtaaatcattttataatgaaaagtcagatagacctcacacatacagaatg
gatagcaatcagaatcatgctagaagtaatgttgaagattcaaaattaattgaaaagaca
tctgctgtggtagaagaaaaaaaatatgacattgaaattacaaatatcgaaccatctctg
ataagtgaatgtgactcggatgtgaaagaagaagaggttttaaaagttgatgctttagat
ggagaagaaattgtttgcatgtccagaagggagcgtgtttccataggtgattatcattat
atccgaatgaatgcatttcctcttaccaaacatgatgcagtatcttcattagattctgta
agtagtgacgaagtagatggggaagtgtttgaagataccacaaaggagaattgttctgct
cttggtgaaccgaatagtgttgaaaaacaggaaaagtataaaagagacaaaaagagagct
gtccggtttcttgcttcttactggagcagggattcgttagaagcagttgatatgattgat
gctgactttaatgggaataatgaagatgatgaagttgacatggatatcgtaccgaaagta
aacataagaacggataggagtcagtcagtcgtgaaaaaacatgcttccgttctaggtgaa
cttaaatctcaagtgaaggcagtgaaacaagaacaattacagaaagaaaaggatgcaagg
agacggtttggcaatgttttaaaagaattaaaagcatacagcctggaattggatgaggag
acaaaatggatacgtggtcacataaaacgccgggaatgttcaagttttataccacctgcc
aacactccagaagaagaaaggagaaaagttaattgccagtgtggatatgcctacaacaaa
catattccaaatgcagacaaaaagcacctggaagatgaaaagtgggcatacaagaaacat
tccatccagaaaacaacaaatgcgtttggagacatagaatttgtgggctatggtggaaat
gtgggaaagtatatacgggtagacgtagacacaaagatgtcggacatgttagacctgatg
atgcaggtatggggactggacaagccaaatcttctcatctcagtgactggtggtgccaaa
aactttcaaatgaacaaacgactcaaggagacattcagacgaggtctgatgaagactgct
ttaacaacaggagcttggattgtgacaggagggactcatgctggtgtgatgaaacacgta
ggcgaagctgttaaagattttggtgtagcatcaacatcaaagaaccctgttatctcaatt
ggtatagcaccatgggggtgtatacaaaacaaagaagttctcattgatgatcagtgtaca
ggattgtggccagctaactacagaattgagaaggaacagaaacctaaggagagttttctt
gacccaaatcatacacattttatccttgtggataatgctacagaacacaagttcgcagtg
gagattccgttcagagcaagactagaaaataaaatagccaaaataagaacagacacagga
gacaatgcagtatcagtgcctatagtgttgttagtgttggagggcggaccaggtacgttg
gagacggtacatcaagctatacaaaacaatacaccatctgtgatagtaaaggggtcgggt
agagctgctgatattctagcatacgcttatcagaactcaaaggaagaagaaatagaagca
acagaccaggaaggaaagaaacagaaaaaagcacggagattcatggatgattccctgcta
gtagaagtgaaagagatggtggaaaaagagtttaagaacgatgtagatacacatgttggt
cgtataaaagactgtctagaaaaatgtgacctcatgtcagtgtttgagctagataataag
tcaggtgttaaagagattgatgttgctatgttacaggcattattgaaagccaataagaat
caggtatttgaccagctacgtcttgccctagcctggaacagaattgatgttgcaaaaagt
gatatcttcactgatgataaaagatggccgactggaagtttggacgatgttatgttctct
gctatacaactgaacagggtagattttattgaactgtttctggaccatggagtttctctc
agggaatttcttacaaagaaaagacttctattgttatataataagatatcttcaaattgt
ttactgaggactttgctggacagagtcaaacacaaggaggacagtcatcggaagaatttc
tcgctactagatgtaggtattctgattcaaagtttgatgggtgattcattccgtcctata
tacacaactaaaccagaatatgcctatctagatgttgacctgttacttgatggtttaaca
acaaagaaagctaaagaaggagggatatctgcattcaaagcaatgacggaacttgcaatg
aaccctgcaagtaaccaagacgatgttgatggtagagcaaatcagaaacatcagtcaaat
tctgactttgagaatccatctcaggaactgtttatatggtctgtactgatgatcagacaa
ggtatggctaaactgttctgggcggaaggcaaggatgctatagctgcagcattagtggct
aacagcatacttcaagctatgagaaataaaacagatgacacagaagtggtgctcaaaatc
cagcatgacattgatgaatggtctgagttagcagtaggtgtgttgagtgaatgttactca
acggatgagaagaaagctcaggatttgttagtacgggagcagactaactggggtgataca
acatgtatgctgatagccgttaaagctgataacaaagtcttcatctcacagacagcatgt
cagtctttactgaacagtatatggatgggaaagctggcacaagataattcatcatggaag
ctggtgttatgtgtactatgtccacctttagcattggttctgctaaactttcaaaagaag
caggttgaaaaacctaacaaccaattacaaaatcagctttatgagttggataataataaa
aaggatgatgttgataaaaaacttgtgagacgacagacgacatttatgaaaagcaatttg
aaaggaagtagaacctcattacgagtaggtgaagaaagtaaggaccaaactgagaatgat
gagcaagaacagaaaaaaatgttgggtgttcgagaaagaatctactacttctttaatgcc
ccagtgatcatctttatgaataatgtgttgtcataccttgtgttcctaggactgttcacg
tatgttctgatatttgatttcaacccaaatgtaacaactgctgagatcattctcatgatc
tgggtatttacaattttctcagaggaagtacgacagatatcgagggatattttatctcaa
aatagaagacaggttgcaacaactgcttctaattccctggcggccaaattacaaagttat
atcacggatacctggaatatcgtggacattataacgatagtgttgttcattattggaatg
gttctcagatttctaccacattcaactacgtttgaggctgccagagtatttctcgcgctc
aattttgtctcgtttttcctgcgtctgctgcatatattctctgtccataaggagttagga
ccaaagcttgtcatgattggtcgaatggttcaagatttgatgtattttctggtcatattg
atggtgtttgttgtgtcgtatgccatcgcctcacattctatcctcttcccaaactctccg
ttaagatggtacaccattgtagacgtcatacggaaatcttactggaacatttatggtgaa
ttattccttgaggaaattgaaggcactgctgattgttcatatgatgaggtgatgtggttg
aacggcacattacctcgatgtccgaccgacacaggaaagatagttgtacctatattaatg
ggagtttacatgctcctagctaatgtgttacttcttaatcttctcattgccatgttcagt
tacacgtttacattggtccaagataatactgacaaacactggtttttccaacgttattct
ttgatttacgagtattacactcgaccagtgctgtgtccgccactcatatttttctcccat
gtttatctgcttgtaaagttcctattttcctgctgctgctgtcaaaaatctacctctaat
aacgataacgaggatgatttccgtcgtaagtttaaaaacgagcgagagcttgttcaatgg
gaaaatgtgatagcagacgcatttcatcagaaaacagaattaaaagattttgaaagcatg
gagtacaaagtgaatgacacaaatacacttataaaggagttaacaagtcgtatagatgag
ctacaggagcagcagttacagttgtcactgtcagataatgtatcccagtcacagtcacac
ctcacaccgatcacacctgtgtcaccatccagtgttattgttaaaatgccgccaaaactt
gagtttagactggaagctttggagaaaagtatggaaatgacacatgactcacttaagtgg
attatgaattcacttaaagaaggaaaggtggccagtgataccagtgtcccgcccactttc
atagattgggaggagcaaagattagaaggagaaagaaaatctaagaagaaaaagaagaga
aagctagaaatcaaggctggtgaggaacgagccaaagttcgtgagatgttactgcgtggg
ataaattgtcactttaggtctcgaacatcaccatatcccgggtcacttatttcaaggttt
cctgttccagatgataaagtatcatgggaggctgagtacccagaatactcccccagcgcc
tacacagctccggaactcgtacaagatttaaggccagagtgggctgatatagatatattt
caattgacaccgcaacaaagggaggctgctattacctccttcaatgcagtggatggggag
aaacaagtggacaggatgagttttcttggtgaatatgttgtacagaatggtttacccttg
aatccaaaaggtcgcacaggtctacagagtcggggacttctaggaagatggggtccgaat
cacgctggggatcctgtagttactcgatggaaaaagaatgcagacgggagcaaagtactg
aaggagggtaaaccagtgttagagtttgtagccgtgctccgtgcagacaaccagatgtgg
gctcttccaggggcaattttaccaccaggagctaagccagcggatcatttgcaggctgat
ttcactgatgaagccatgggatctctagaaggttctagcaatgaaaaagtagtaagaaag
aaaatgaacaaaatttggaagaaaggagtaaaaatatacgaaggttatgcagatgaccca
cgtaacacagacaacgcatggattgaaacgacagcaattagttaccatgacgaggatggg
gcggccttctctcaatgcaacctacgggctggtgagagggcagagctagtcacatggtta
accgggtcacacaaggtgaccttgcacggatcacatttgtatctagtaaaacttgctgca
gaaagacttggtgcttatttttaa
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integrated database retrieval system
