Ruditapes philippinarum (Manila clam): 132737477
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Entry
132737477 CDS
T09557
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132737477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132737477
Membrane trafficking [BR:
rphi04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
132737477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
132737477
NCBI-ProteinID:
XP_060580754
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MLGSGEFVYKQQHMGVIHVNPSESKSDHSIPALTPSSPSSKFTKSSLLGIDDTNIPFLGV
ALSFWDNILGPRVRHVWHPSQRQTLQSDLLSHITSQVLSCEICRDPFKCDVDYKFYNLPH
KGVIVPAFVFTAKGTHGIAVHSLFLVLPISELKFYLDIHETLTCCFQRLTGKFRVILDKN
DFDVSIDVFTRYLSECVKFLSLVHNSSLANIISISDTAFCPEHVLERDFLTRCVASHLMT
FGRTLVIGETAERINLVLYTLSMFNSQPERTCSLPFCVKDPQPYHHDFFLQGLIKEDGKS
FLPMTEILASRYPTTIIDLTTRDVKQTHTYSDHILHRYETVKNELICLQYGHFEELVVLD
QELHASSAYPDTLVQTFMKEIFELPESCWIREAYITQFMRMLHKRAQCLIECAKAESNDG
TVPLKIQTIKKIRTDLQLHAEGDFRIVLATAEKLKPGIFCFLKSQRKAERDFTKNVEVL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctaggaagtggtgagtttgtttataaacaacaacatatgggtgtcattcatgttaac
ccaagtgaaagtaaaagtgatcattcaataccagcattgaccccatctagccctagctct
aaattcacaaaatcaagccttttaggtatagatgacaccaacattccattccttggcgta
gctctctctttctgggataatattttgggaccaagagtgagacacgtttggcatccaagt
caaagacagacattacagtcggaccttctctcacatataactagccaggtgctgagctgt
gagatttgtagagacccatttaaatgtgatgttgactacaaattttataacctgcctcat
aaaggtgttatagttccagcatttgtgtttactgctaaaggtactcatggtattgctgta
cactcactgtttctagtgttaccaatatcagaactgaagttttatcttgacattcatgaa
acactgacatgctgtttccaaagattgactggcaagttcagagttattcttgacaagaat
gattttgatgtttccattgatgtgttcacaagatatttgagtgaatgtgttaagtttctc
tcccttgtacataactcatcactagcaaatataatttcaatatctgacacagctttctgc
ccggagcatgttttagagcgtgattttttgacccggtgtgttgcctctcatctcatgacg
tttggtcggactctagtcataggggaaacagcagaaagaataaatttggtgctttataca
ctatcaatgttcaacagtcagcctgaaagaacatgctccctgccattttgtgtgaaggac
ccacaaccatatcatcatgacttcttcctgcaaggacttatcaaggaagatggcaaatca
tttctaccaatgacagagatattagctagccgttatccaaccacgataatagatttaact
acacgtgatgtgaagcagacgcatacatacagtgatcatatcttacataggtacgagacg
gtcaaaaatgaactcatctgtctacaatatgggcactttgaagaattggtggttcttgat
caggaattacatgccagctctgcatatccagacacacttgtacagacttttatgaaagag
atatttgagctaccagaaagttgctggatacgagaagcttatataactcagtttatgaga
atgttacataagagagcccagtgtttaatagagtgtgctaaagcagaaagcaatgatgga
actgtaccattgaagattcaaacaatcaagaagattaggactgacctacagctacacgca
gaaggggatttccgaatagttctcgccacggctgaaaaacttaagcctggtattttctgc
tttctgaaaagtcagcgtaaagcagaaagagatttcacgaaaaatgtggaagttttgtag
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