Entry |
|
Name |
(RefSeq) short transient receptor potential channel 7-like
|
KO |
K04969 | transient receptor potential cation channel subfamily C member 6 |
|
Organism |
rphi Ruditapes philippinarum (Manila clam)
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Brite |
KEGG Orthology (KO) [BR:rphi00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:rphi04040]
132743270
Ion channels [BR:rphi04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132743270
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1028 aa
MGFKKNSKRVRKNESDTNLMSVVSMIKLQNMSGGKAKFWRRRNGSSRMSLISNQSQESKT
LVDVEEEFLHAAEFGDIPTVRRLLAENSELNVDCIDALGRTALRLAVKNEHLEVVEVLLE
KSSSRHIYEAVLQAISAGHVQIAENILKHKRYLEIWKERKKFGDDDHFFKTQYEESQFSP
DITPLILAAQKNQYEIVQLLLLRGDRIQKPHKFGCLCQECVNKMKFDQLRSAKYRLNAYR
GMSSEAYISLSSKDPVLTSFQLSHELKNLSRNEKYFKQEYRELSNQLSAYVVKLLDRVRT
QDELELVLNKAGKPNEEKYSSLARLRLALQYGEKKFVSHPSCQQRLDRSWYEGIGPFLKA
NIVKRILMVFAFILAYPFLNLIYIITPKTKIKVLKVLQFPWIKFTVHSASFVAFLLMSVI
STSEDTYILRKNSTLSSDYPQLFEKYQEMKNRSPSSYSYGNDIPIRQMVPTTTQLLISIW
VVGFLYHECTQIYHDGVKAYCLSLYNMVDFAMLITYTCAFGLKYLVMLKVHLSLDYFQST
NITDILNNDDRSTYMLYWIVADRYFWSKFDPINLSEGLFAIANIISFSRISYLLPANEAL
GPLQISLGRMLADIIKCLCLLSIVVVAFLIGLQNLYWYYNVRESIEVEKRNFEVKAQDAF
GDTVKTFRTIFWSVFGRGESDVVTLADYNNSVTEDIGYCLYGLYNFLMVTVLLNMLIAMM
ARSFQAIAESSDVEWKFARSQLYMEYMTEEDVLPVPLNIVRLPRAIFEWIFDCWDKDEEN
LKIPVEMNGTTLNDMPVTRNGADQPLQSVTQIASQLMHRNDSASSSVDLSAVDIYEGNIT
ANDPALIDRPKVNRRRHMQRNSIPGFLDGSKSYQRVMQRIIQRYIFDIQREAEVTEDDFE
EIKQDLSSFRYEMLNVMRSREMQFGELHKSLSRISSSLNLDTGSTPSNGAYDKKVLSSVR
DKLLAQKMRRADSFRNARTPSEGALDEDPTLDDEEDAGDSIDKSEDEIVQQNHLGSDKNG
GVDNPAFE |
NT seq |
3087 nt +upstreamnt +downstreamnt
atgggatttaaaaaaaattcgaagcgcgtgcggaagaatgaaagtgatactaatttaatg
tcagttgtgtctatgattaaattgcagaacatgtcgggaggtaaagcgaagttttggcga
cgaaggaatggttccagtcgcatgagtttaatttctaaccaaagccaggaatcaaaaacg
cttgtggacgttgaagaggagttcctgcacgcggcagaatttggggatattccgacagtt
agacggctactagcagaaaatagtgaactcaatgttgattgtatagacgctctcggtagg
acggcgctgagattggctgtaaaaaacgagcaccttgaggtcgttgaagtactattagag
aagtcgagcagccgacatatttacgaggcagtgttgcaggctatcagcgctggacatgtc
cagattgccgagaacattcttaaacataaacgttatcttgaaatatggaaagaaagaaag
aagttcggggatgatgaccactttttcaaaacacaatacgaggagtcacagttctccccg
gatatcactccgcttattttggcggcacaaaagaaccaatacgaaatagtgcaactactg
ttattgcggggtgatcggatacagaaaccgcacaaatttgggtgtttgtgtcaggaatgc
gttaataaaatgaagtttgatcaattgcggtcggcaaaatatcgcctcaatgcttataga
ggtatgtcaagtgaagcctatatatcattgtcaagtaaagatccagtgctaacgtcattc
caactgtctcacgagctgaaaaatctgtctagaaatgagaaatactttaagcaagagtat
agagaattatctaatcagttaagtgcatacgtggtcaagttactggatcgtgtgaggact
caggatgagctagaacttgtgttaaataaagcaggaaaacctaacgaagagaagtacagt
tcactggcaagactgcgcttggctttacaatatggagagaaaaagtttgtatcacatcct
agttgtcagcagaggctagatagaagctggtatgaaggtatcggcccgttcctaaaggca
aacattgttaaaaggatcctgatggtgtttgccttcatattggcatacccgtttctcaat
cttatttatataatcacaccaaaaacaaaaataaaggttttaaaagttctacaattccca
tggataaagttcacagtgcactcagcatcttttgtcgcatttctgctaatgagtgtcatc
tcaacgagtgaggacacatatatcctccgcaaaaacagcacgctaagctctgactaccct
caactgtttgaaaaataccaggagatgaagaacagatctcccagtagctactcttatgga
aatgatattcctatacgacaaatggttcctaccacaacacaactattgatttcaatctgg
gttgtagggtttttgtaccatgaatgtacacagatttaccacgatggagtgaaggcgtac
tgtctgtcgttatataacatggtagatttcgccatgttgatcacatatacgtgtgcattc
ggtttaaaatacctcgtcatgttgaaggttcacctgtcgctagattatttccagtcaaca
aatataacagacattctaaacaatgacgatcgttcaacatatatgctgtactggattgtt
gcagatcgttatttctggagcaagtttgacccaatcaacttatcggagggattatttgct
atcgcaaacatcatcagtttttcaaggatatcatatctactgccggctaatgaagcccta
ggacctcttcaaatatcgctcgggagaatgctggcggatatcatcaagtgtctatgtctc
ctaagtatagtagttgtagcgttcctgatagggttacaaaacctttactggtactataat
gtccgggaaagcattgaagttgagaagcggaactttgaagtgaaagctcaagatgcgttt
ggagatactgtgaagacattccgtacaatattctggtcagtgtttggtcgtggggagtcg
gatgttgtgacacttgcagattataacaatagtgtcaccgaggacattggctactgtttg
tacggactatacaacttcctgatggtcactgttctacttaatatgctgatagctatgatg
gcccgttcattccaagctattgcagaatcgtcagatgtagaatggaaattcgctcgaagt
cagttgtacatggaatatatgaccgaggaagacgtgttacccgtgcctttaaatatagtt
agattaccacgtgcaatttttgagtggatatttgattgctgggacaaagatgaagaaaat
ttaaaaattcctgtcgaaatgaacggcactaccttaaatgacatgccggtcactagaaac
ggtgccgatcaacctttacaaagcgttacacaaattgctagtcaactaatgcatcggaat
gactcggcgtctagttctgttgacttgtcggctgtcgacatatacgaggggaatataaca
gcgaacgatccagcattaattgacaggccaaaagttaatagacggcgtcacatgcagagg
aacagtataccggggttcctcgatggcagcaaaagttatcagcgtgtcatgcaaagaatt
atacagcgatatattttcgatattcaaagggaagcagaagtcactgaagacgactttgag
gagataaagcaggatttgtcaagtttccggtacgagatgttgaatgttatgagaagtagg
gagatgcagtttggagagttacataaatcactttcaagaatatcatctagtttaaacctt
gacactggaagtacgcccagtaatggtgcctatgataagaaggttttgagcagtgttcga
gacaaacttttggcccagaaaatgaggagggcagactcgttccgcaatgctagaacacca
tccgagggagccctggacgaggatccgacccttgacgatgaagaggacgctggagattct
attgataaaagtgaggatgaaatagttcaacaaaaccacctgggatctgataaaaatggt
ggtgtcgataatcctgcatttgaatag |