Entry |
|
Name |
(RefSeq) actin, adductor muscle
|
KO |
|
Organism |
rphi Ruditapes philippinarum (Manila clam)
|
Pathway |
rphi05100 | Bacterial invasion of epithelial cells |
|
Brite |
KEGG Orthology (KO) [BR:rphi00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132744407
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132744407
09142 Cell motility
04814 Motor proteins
132744407
04820 Cytoskeleton in muscle cells
132744407
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132744407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rphi03021]
132744407
03019 Messenger RNA biogenesis [BR:rphi03019]
132744407
03036 Chromosome and associated proteins [BR:rphi03036]
132744407
03029 Mitochondrial biogenesis [BR:rphi03029]
132744407
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:rphi04812]
132744407
04147 Exosome [BR:rphi04147]
132744407
Transcription machinery [BR:rphi03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132744407
Messenger RNA biogenesis [BR:rphi03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132744407
Chromosome and associated proteins [BR:rphi03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
132744407
NuA4 complex
132744407
Chromatin remodeling factors
BAF complex
132744407
PBAF complex
132744407
GBAF(ncBAF) complex
132744407
SWR1 complex
132744407
Mitochondrial biogenesis [BR:rphi03029]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
132744407
Cytoskeleton proteins [BR:rphi04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
132744407
Exosome [BR:rphi04147]
Exosomal proteins
Proteins found in most exosomes
132744407
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
376 aa
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF |
NT seq |
1131 nt +upstreamnt +downstreamnt
atgtgtgacgacgaagttgccgctcttgttgtagacaatggctccggtatgtgcaaagcc
ggattcgccggagacgatgccccaagagccgtcttcccttccatcgtcggccgcccaaga
catcagggtgtgatggttggtatgggtcagaaggacagctatgtaggagatgaagcccag
agcaagagaggtatccttaccttgaaatacccaattgagcacggtatcgtcaccaactgg
gacgatatggagaagatctggcatcacacattctacaatgaactccgtgtagccccagaa
gagcacccagtcttgctcactgaggccccactcaaccccaaagccaacagggaaaagatg
acccagatcatgtttgagaccttcaacgcaccagccatgtacgtcgccatccaggccgtg
ctctcactgtatgcttccggtcgtaccaccggtatcgtactcgactccggagatggtgtc
acccacaccgtcccaatctacgaaggttacgctcttccccacgccatcctccgtcttgac
ttggctggtagagatcttactgattacttgatgaagatcctcactgaacgtggttactca
ttcacaaccaccgctgaacgtgaaattgtcagagatatcaaggagaagctttgctatgtt
gctcttgacttcgagcaggaaatggccaccgccgcttcttcatcctccctcgagaagagc
tacgagcttcccgacggacaggtcatcaccatcggtaacgagagattccgttgcccagaa
tcccttttccagccatccttcttgggtatggaatctgctggtatccatgaaaccacatac
aacagcatcatgaagtgtgacgtcgacatccgtaaggatctctacgccaacaccgtcttg
tctggtggcaccaccatgttcccaggtattgccgacagaatgcagaaggaaattaccgcc
cttgctccatcaaccatgaagatcaaaatcattgctccaccagagaggaaatactccgtc
tggatcggtggctccatccttgcttccctctccaccttccaacagatgtggatctccaaa
caggaatacgatgaatccggcccatccattgtccacaggaaatgcttctaa |