Ruditapes philippinarum (Manila clam): 132744805
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Entry
132744805 CDS
T09557
Name
(RefSeq) toll-like receptor 4
KO
K10159
toll-like receptor 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132744805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132744805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132744805
04054 Pattern recognition receptors [BR:
rphi04054
]
132744805
04090 CD molecules [BR:
rphi04090
]
132744805
00536 Glycosaminoglycan binding proteins [BR:
rphi00536
]
132744805
Membrane trafficking [BR:
rphi04131
]
Endocytosis
Phagocytosis
Toll-like receptors
132744805
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of breast milk
132744805
Pattern recognition receptors [BR:
rphi04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
132744805
CD molecules [BR:
rphi04090
]
Proteins
132744805
Glycosaminoglycan binding proteins [BR:
rphi00536
]
Hyaluronan
Cell surface receptors
132744805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_1
LRR_5
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
132744805
NCBI-ProteinID:
XP_060589565
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MKGAFLVLLISALLASVAMINCVERDNDLSNTNDVYCDITENVEEYLADCSYRNLTLTGL
HYALPPNKTYKITGLNLIGNSIKRLSNMSWGEYTSLRYLSLANNGIEVLEEGDFNNLSGL
ELLDLSLNRIRYTCISEQVFTVLTNLQYLDLKQNLTDIWQNETYPIGLSNLRHLKFLMID
GLDNGTLPKMKNLSELYLSGEYGRCNITNLTSGYFSNVQNVQHLFMSNCSIKQIVNGTFR
NMSILSSLDLARNIQLGLKSMANITFGLDVHGSIKRLNLNSLYDYCNYDYCEHLEEKDFK
YLFNTSIEMLLLEKNHLVRMTEAAVDLFPESLRYMSISDNMLLYGKYVKDLMTKHTTHNL
VYVDTSKMYKTHISLPKASSVMYEIIATELHDEDGVAKQYWPEKSQSFTSLYNAMLTRLR
ISDDFADIWNTMRKNNISNGIGTANTSLQFAKADKQAPWKSKLEYLDLSDNLPGVIEMAV
EIFNSTPNITFLNVSNNYLGYPLLEIHKSTALFESAQKLRTLDLSNNGIGASLHSDVFAN
LSQLQYLYLSNNKLTNISFEISHLKELKYLDLSFNHLEEVCKKARRSLDNIKDVTLNLQY
NSMKCTCRNIKFVKWLEENKNKIKNLYDTNCTLENDTSVPLGELDFHQFYFECSPPAYYN
IILATSLSILAFVITVTCGLVYRFKWNLRYLYYMTKFKLVGGYQPIDDREYDKDVFVSYA
NEDRMFVHQHVVKELETNGNISLLVHDRDFRAGEFVADNIMRAITSTRRTLVVLTEAYIG
SKWCMYELNMATMEAADTDRNVLCVILKEDIPVKYLPIEIINILKKKTYMEYPTEEEHMA
LFWNRLRATLSRET
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagcgtttttagtcttgcttataagtgccttactggcatcggtggcaatgata
aattgtgtggaacgagataatgacctatctaacacgaatgacgtttattgtgacataact
gaaaatgttgaagaatacttagctgattgtagttacagaaatctaactctgacaggttta
cattatgctttacctccgaataaaacttataaaataactggtttaaacttgattggcaac
tcaataaaacgactgagtaacatgtcatggggggaatatacgtcccttcgatatttatca
ttggcaaacaatggaatagaagtactggaagaaggtgatttcaacaatctgtctggactg
gaattgctggaccttagcttgaaccgtatacggtacacgtgcattagtgaacaagtcttt
acagtattaacaaacttacaatatctcgacttaaagcaaaaccttaccgatatttggcag
aatgaaacatatccgatcggactttcaaatctgcgacatttaaaatttctaatgatcgac
ggattagataatggtactttgcctaagatgaagaatctttctgaactttatctatcaggc
gagtatggtcgctgtaatatcacaaatttaacttccggctatttttcaaatgtgcaaaat
gttcagcatctttttatgtctaattgctctatcaaacaaatagttaatggaacatttagg
aatatgtcgattttaagttcgctggaccttgctagaaatatacaattaggacttaaatca
atggccaatataacatttggtttggacgtgcacggctcaataaaacgacttaatctgaac
tccctgtatgactattgtaattatgactattgcgaacatctagaggagaaggattttaaa
tatctctttaatactagtatagagatgttattgttagaaaagaatcacctcgttcggatg
acagaagcggctgtagatttattcccggagtctttacgatatatgtctataagtgataac
atgttactatatggtaaatatgtaaaggatttgatgaccaaacacacaacacataacttg
gtatatgtggatacaagtaaaatgtacaaaacccatatatctctaccgaaggcctcttct
gtgatgtatgaaataattgccacggagcttcacgacgaggatggcgtagcaaaacaatac
tggccagaaaaaagtcaatccttcacaagcttatacaatgcaatgttgacgcgtttaaga
ataagtgatgattttgcagatatttggaacacaatgagaaagaataatatcagtaatggt
atcggtactgcaaacacatcgctgcagtttgcaaaagcagataaacaagcgccatggaag
agtaagctggaatatcttgatttgtcagataatcttcctggagttattgaaatggctgtt
gaaatttttaacagtacacctaatataacattcctcaatgtatcaaacaattatcttggt
tatcccttacttgaaatacataaaagcactgcgttgttcgaatcagctcaaaagctccgt
acattagatcttagtaacaacggaattggtgcatcgttacattcagatgtctttgctaac
ttgtcacaactgcagtacttgtatctctcaaacaataaattgaccaacatttcgtttgaa
atttcacatcttaaagagttgaagtatctcgatctcagtttcaatcatttggaagaagtt
tgtaagaaggctagacgctcccttgacaatataaaagacgttacactaaacttgcaatac
aattccatgaagtgcacgtgcagaaatataaaatttgtaaaatggcttgaggaaaataag
aataaaataaagaacttgtatgatacaaattgtacattggaaaatgatacatctgtacca
ttgggcgaacttgactttcatcaattttattttgaatgttctcctccagcatattacaat
attattttagctaccagtctgtccattcttgcttttgtcatcactgtcacgtgcggactt
gtctacagatttaaatggaatttacggtatctatattacatgacgaaattcaaattagtc
ggtggctaccagcctattgatgatagggaatacgataaagatgttttcgtgtcgtatgcg
aatgaggacagaatgttcgtgcatcaacatgtagtgaaagaattggaaacaaatgggaat
atatctttgttagtccacgaccgtgactttagggcaggagagtttgttgcagataacatt
atgcgagcaatcacgtcaactcgtcgtacacttgttgttttaacagaggcatatattggc
agtaaatggtgcatgtatgaactgaacatggcaactatggaggcagcagacacggataga
aacgttctgtgtgtcattctgaaggaagatattcctgtcaaatacctaccaatagagatc
ataaatattctcaagaagaaaacatacatggaatatccaacggaagaagaacatatggcg
ttattctggaatagattaagagcaacactttctcgtgaaacctga
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integrated database retrieval system
