Ruditapes philippinarum (Manila clam): 132745531
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Entry
132745531 CDS
T09557
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132745531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132745531
04121 Ubiquitin system [BR:
rphi04121
]
132745531
Membrane trafficking [BR:
rphi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
132745531
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132745531
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ASA1
F-box-like
NBCH_WD40
CFAP251_N
Beta-prop_WDR75_1st
ANAPC4_WD40
TRM82_WD
F-box
PAC11
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
132745531
NCBI-ProteinID:
XP_060590464
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MDFTEHLLPELLDKILSYLTEKELVTFSKCCAKWREITNKDTLWLHHCMRRGWLRFGLNG
DINRETHLNVKMSNIGGNSPVFQLYVPEETRLSPICKWKNIFIRVHHLNKNWRKGRYSVS
PLLKGHAEKVTALACNGKYIVSGSEDKSLRMWDMAQATCIKKLDGHLDTITKIIWKGNTL
ITGCADSSIRVIDSTNFTLLFSLQGHSGSVDHMTLVGKVLVSAATDRTLRMWYLPDRRLV
NIFRGHTDDIECMYSHGTHVVTGSWDKTLILWDIEHAEQFHMYSGHNEVVTCCYFDGEKI
VSGSGDNDLRIWQISPPGCSHILQGHEGEVYCLAANHHVIASGSSDSTVRIWNYNGKCQH
VLQGHLGIVRCLHICEERLVSGGDQKKVIVWDYKKGVQMNIVHRHPSLLHLMWVNETKLI
TASPERPGTVAVLSYW
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacagaacacctactgccagaattattagacaaaatcttatcatatttaaca
gaaaaagaacttgtgactttctcaaaatgttgtgctaaatggagagaaataacaaataaa
gacacattatggttgcatcattgtatgagaagaggatggctaagatttggtctaaatggc
gacatcaacagagaaactcatcttaatgtaaagatgtcaaatattggtggaaattctcca
gttttccaattatatgttccagaagagaccagattatccccaatttgtaagtggaaaaac
atttttattagagttcatcatttaaataaaaactggagaaaaggtcgttattcagtttca
ccattgctgaaaggacatgcagaaaaagttacagcattagcatgtaatggaaagtatata
gtttctgggagtgaagacaagtcattaagaatgtgggacatggcacaagctacatgtatc
aagaaattagatggacaccttgacactattacaaagattatttggaaagggaacacacta
atcacaggttgtgctgacagttctatacgtgtgatagactctacaaatttcaccctgtta
ttttccctgcaaggacacagtggcagcgttgatcacatgacacttgttggtaaagttcta
gtttctgcagcaacagacagaacattgcgaatgtggtatctcccagacagaagacttgtc
aacatattcagaggtcatacagatgatattgagtgtatgtatagccatggtacacatgtt
gtgacaggatcctgggataaaacactaatactgtgggatatagagcatgctgaacagttt
catatgtatagtggacataatgaagtagtgacatgttgttattttgatggagagaagata
gttagtggtagtggagacaatgatttaaggatctggcaaatttccccaccaggatgttca
catatactgcaaggtcatgaaggggaagtgtactgtctagcagcaaaccatcatgtgata
gcatctggatcatcagatagtactgtcaggatatggaactataatggaaaatgccagcat
gttctacagggtcatctaggtattgttagatgtctacatatatgtgaagaacgactagtc
agtggtggtgaccagaaaaaagtcatagtttgggactataaaaaaggagttcagatgaat
attgtacatagacatccatcattgttacatttaatgtgggtcaatgaaactaagttaatt
acagcatctcccgaaagaccaggcactgtggcagtactcagttactggtag
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