Ruditapes philippinarum (Manila clam): 132745531
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Entry
132745531 CDS
T09557
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132745531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132745531
04121 Ubiquitin system [BR:
rphi04121
]
132745531
Membrane trafficking [BR:
rphi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
132745531
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132745531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
F-box-like
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
F-box
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD_LRWD1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
132745531
NCBI-ProteinID:
XP_060590464
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MDFTEHLLPELLDKILSYLTEKELVTFSKCCAKWREITNKDTLWLHHCMRRGWLRFGLNG
DINRETHLNVKMSNIGGNSPVFQLYVPEETRLSPICKWKNIFIRVHHLNKNWRKGRYSVS
PLLKGHAEKVTALACNGKYIVSGSEDKSLRMWDMAQATCIKKLDGHLDTITKIIWKGNTL
ITGCADSSIRVIDSTNFTLLFSLQGHSGSVDHMTLVGKVLVSAATDRTLRMWYLPDRRLV
NIFRGHTDDIECMYSHGTHVVTGSWDKTLILWDIEHAEQFHMYSGHNEVVTCCYFDGEKI
VSGSGDNDLRIWQISPPGCSHILQGHEGEVYCLAANHHVIASGSSDSTVRIWNYNGKCQH
VLQGHLGIVRCLHICEERLVSGGDQKKVIVWDYKKGVQMNIVHRHPSLLHLMWVNETKLI
TASPERPGTVAVLSYW
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacagaacacctactgccagaattattagacaaaatcttatcatatttaaca
gaaaaagaacttgtgactttctcaaaatgttgtgctaaatggagagaaataacaaataaa
gacacattatggttgcatcattgtatgagaagaggatggctaagatttggtctaaatggc
gacatcaacagagaaactcatcttaatgtaaagatgtcaaatattggtggaaattctcca
gttttccaattatatgttccagaagagaccagattatccccaatttgtaagtggaaaaac
atttttattagagttcatcatttaaataaaaactggagaaaaggtcgttattcagtttca
ccattgctgaaaggacatgcagaaaaagttacagcattagcatgtaatggaaagtatata
gtttctgggagtgaagacaagtcattaagaatgtgggacatggcacaagctacatgtatc
aagaaattagatggacaccttgacactattacaaagattatttggaaagggaacacacta
atcacaggttgtgctgacagttctatacgtgtgatagactctacaaatttcaccctgtta
ttttccctgcaaggacacagtggcagcgttgatcacatgacacttgttggtaaagttcta
gtttctgcagcaacagacagaacattgcgaatgtggtatctcccagacagaagacttgtc
aacatattcagaggtcatacagatgatattgagtgtatgtatagccatggtacacatgtt
gtgacaggatcctgggataaaacactaatactgtgggatatagagcatgctgaacagttt
catatgtatagtggacataatgaagtagtgacatgttgttattttgatggagagaagata
gttagtggtagtggagacaatgatttaaggatctggcaaatttccccaccaggatgttca
catatactgcaaggtcatgaaggggaagtgtactgtctagcagcaaaccatcatgtgata
gcatctggatcatcagatagtactgtcaggatatggaactataatggaaaatgccagcat
gttctacagggtcatctaggtattgttagatgtctacatatatgtgaagaacgactagtc
agtggtggtgaccagaaaaaagtcatagtttgggactataaaaaaggagttcagatgaat
attgtacatagacatccatcattgttacatttaatgtgggtcaatgaaactaagttaatt
acagcatctcccgaaagaccaggcactgtggcagtactcagttactggtag
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