Ruditapes philippinarum (Manila clam): 132748108
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Entry
132748108 CDS
T09557
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00514
Other types of O-glycan biosynthesis
rphi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132748108
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132748108
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132748108
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
132748108
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
O-Glycan
132748108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
COPI_assoc
DUF7709
Motif
Other DBs
NCBI-GeneID:
132748108
NCBI-ProteinID:
XP_060593642
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MRVSCKRLAKVISLCLILTGTFCMLLNNINNYEEQNNEQEKHFRQMSQSVEKVLDVTNSY
KLKDDVIVRLQRSAKGLTPVQGYVNKFQVAKLAVTSLEDIFISVKTTAKYHKSRLHLLLD
TWISTAKKQTFIFTDADDAELKEKIEANHVINTNCSGDHNRKSLVCKMSQEFDWFINSRK
RWFCHVDDDTYINIPRLVSLLQQYNHTDDWYLGKPSLSHPIEVMDRSHPGQNVAFWFATG
GAGFCISRALALKMVPYAGGGRMKRAGDRIRLPDDCTIGFIINSILRKDLTVIKLFHSHL
EGLRRIGVPQIKDQITFSYALKPGRENVVNIHGFDTQKDPTRFLSIHCHIHPLSQLCLPL
NS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatcatgtaaaagattggcaaaagttatttcattatgtctgattcttacgggt
actttttgtatgcttcttaataatataaataattatgaagaacaaaataatgagcaagaa
aaacatttcagacaaatgtcgcaaagtgttgaaaaagttttagatgttacaaactcttac
aaattaaaggatgacgtgattgttcgattgcaacgaagtgcaaaagggctcacacctgta
cagggttatgtgaataaattccaggttgcaaagcttgctgtcacatctctggaagatatt
tttataagtgtcaaaactactgctaaatatcacaaatcccgtttacatttgctgcttgat
acatggatcagcactgctaaaaaacagacatttattttcactgatgcagatgatgcagaa
ttgaaagaaaaaatagaagccaaccatgtgatcaataccaactgctcaggggaccataat
aggaagtcgctggtgtgcaaaatgtctcaagagtttgactggttcataaactcgcggaag
cggtggttttgtcatgtagatgatgatacatatatcaatatacccagactggttagtctg
ttacagcagtataatcatactgatgactggtaccttggtaaacccagtctaagccatcca
atagaggtgatggacaggagtcatccagggcaaaatgtggcattttggttcgctacagga
ggtgcaggcttctgtataagtcgtgcattagcactaaagatggttccatatgcaggtggt
gggcggatgaagagggctggggatcggattcgacttccagatgattgtacaataggattt
attataaatagtattttacgtaaagacttgactgtgataaaattattccattcacacctt
gaaggactccgaagaattggtgttcctcagatcaaagatcaaataacatttagctatgct
ttaaaaccaggcagagaaaatgttgtaaatatacatggctttgatacacagaaagaccca
acaagatttttatccatccactgtcacatacacccgctaagtcaactttgtttacctctc
aacagttga
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