Ruditapes philippinarum (Manila clam): 132749421
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Entry
132749421 CDS
T09557
Name
(RefSeq) nuclear hormone receptor HR96-like isoform X1
KO
K08539
vitamin D3 receptor
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132749421
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132749421
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rphi03310
]
132749421
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132749421
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132749421
Nuclear receptors [BR:
rphi03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
132749421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
132749421
NCBI-ProteinID:
XP_060595136
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MENSMEWLSNDVCEGFANCGISVDGGSNDVTQSFSDKTQTNVKTNLYESAGHDRDFPNSD
FSGNGIICGDQMKAGQCNFDYGSKAVDSDQTRLSQGLISKPKYEVADSSMAELSNGKKRE
QKRRPKPKDGSVLICQICGDRALGYNFDAITCESCKAFFRRNALKAKVFTCSFEGNCKLD
QHTRKFCSGCRLKKCFDVGMKKDWILSDDQLAKRRKKSGRTSSSEEKMYADEKMYADEKM
YADVQKYSVQNEQTGLPQQMTTRLPYLPPHKMESSFQSPGSYNDTDTNSTAYFSDSTDTS
NLSSPLTNFAQDIIKTEKSEDDYTRPMDLELEAEIRQLEKEYASVFDSGYSEDQAKKMVE
KPHNANDLFNMTDIFIRRLIKFAKQIPEFKNLKQEDQIHLLKGGIMEILVLRSAMGFDPT
NHKWKVKQMQDTKEHNIDPSIIKEQLGTGMYTEHVKFVKTLHQLTMSNNTIMTLMFVIEI
FAPDRPNVKNLEAVTQAQDKFTHWLQMYLESIMPVCEARTLYPKLLMMLLDVRNLGESSA
KLASHLDITKLEPLLIEVFNLQK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcgatggaatggttgtccaatgatgtgtgcgaggggtttgccaattgtggc
attagtgttgatggtggtagtaatgatgttacgcagtctttctctgacaaaacacaaaca
aacgtgaaaactaatttgtatgaaagtgccggacatgatagggattttccgaattctgat
ttctctgggaatgggataatttgtggtgatcagatgaaagcggggcagtgtaattttgat
tacggctctaaagctgtagactccgaccagacgagactctctcaaggtcttatttccaag
ccgaaatatgaagttgctgattcaagtatggctgaactgtcaaatggaaagaaaagggaa
caaaaaagacggccaaagccgaaggatggctctgtattaatatgtcagatatgtggagac
agagcacttggctacaattttgatgcgataacatgtgaatcatgtaaagccttctttaga
agaaatgctctcaaggcaaaggtttttacctgcagttttgaaggaaactgcaaactcgac
caacatactcgaaagttttgctcaggatgtcgactgaagaaatgttttgatgttggaatg
aaaaaggactggatcctcagtgatgatcagttggctaaacggcgtaaaaagagtggacgg
acatcatcgtcggaggagaaaatgtacgccgatgagaaaatgtacgctgatgagaaaatg
tacgctgacgtccaaaaatattcagtacaaaatgaacagaccggcttgccacagcagatg
acgacccgactcccatatttaccaccacataaaatggagtcctcatttcagtcaccgggt
agctacaacgacactgacacaaactcgaccgcctacttctctgactcgactgatacaagt
aatttgagtagtccgctcacgaattttgcccaagacattataaaaactgaaaaaagtgaa
gatgattacacgagacctatggatctggagttggaggcagaaattcggcagttggaaaaa
gaatatgcgtcagtgttcgatagtggttactcggaagatcaggctaaaaaaatggttgaa
aagccgcataatgctaatgacttgttcaacatgacagatatttttatacggcgcttgata
aaatttgccaagcaaattcccgagttcaagaacttgaagcaggaagatcagattcattta
ttaaagggaggtattatggaaatcttggtgttaaggtctgcaatgggatttgacccgaca
aatcacaagtggaaggtaaaacaaatgcaggatacaaaagagcataatatcgatccatca
attataaaggagcagcttggtacgggtatgtatacagagcacgtgaaatttgtgaaaact
cttcaccaactcacgatgagcaacaacactataatgacactgatgtttgtgatcgagata
ttcgcaccggatcgaccgaacgtgaaaaacttagaggccgttacacaggctcaggataaa
tttactcattggctacagatgtatttagaatccattatgcctgtttgcgaagcacgcact
ttgtacccgaagctcttgatgatgcttttggatgtgaggaaccttggcgagtctagtgcc
aagcttgcttctcatttagacattacaaaactagagccgttactcattgaagtgtttaat
ttgcagaaatga
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