Ruditapes philippinarum (Manila clam): 132751974
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Entry
132751974 CDS
T09557
Name
(RefSeq) F-box/LRR-repeat protein 4-like
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132751974
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132751974
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132751974
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132751974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_14
LRR_At1g61320_AtMIF1
LRR_8
F-box_4
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
132751974
NCBI-ProteinID:
XP_060598191
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MFSRIFKKEKKDPVGEYVKSGGNEKDVVIFNALEVTDFSSQYGSETSISYTASNLAGRGN
IYPSYGDFTQACVFRTYGPWWDIVPSSIKSFKRTPPSFCSQDYIELSFQRKIYPLKLEIY
ETYNPGCVVKILACERSEDTDVDTGHSLTRWKTLWEGEPTLAGPTSRMFCPSLEKSPFPT
DLIRLELCHKLVHYYTELDYVVLYGTISQEEEEEKTMVYSRCLVSDKEGDHMTQVSMAMT
QFENLNIGSKSGSPPRSEVSTSQEGSSQGKSKTLEIFSNNKLEKGSECYELGEVNVLGEM
ISHGEVNQQISEEFEPESDNGFFDLLPEEVIQVILSFLDVLSLCRVARSSKLLYKHSYDS
LQYTELNLQPHWPQVNDIALESLHNRSRFLQRLNLSWCHGNIVSEDSFCRYIKACGQNLQ
DLYLSSCSFVTQISIHEISQSCPNLKELDIGSCKEIVSNGFYDISNLKHLERLNLYRTNI
DQDALLRIIRSCTELKHLNLGSTNCVHVFDEILLAIGEHTKKLVSLDAWRCRTVSNVGVS
ALAGGCSHLEELDLGWCSDVKSSSSCLIELVKNCPNLKKLFLTANRTVCDADLLAIATYS
KHMEQLDILGTRQVTADAAQKVLENCAKMTFFDVSFCSGIDNYTVEHWLREFPHVAIKKS
FQN
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgaatttttaagaaggagaaaaaggatcctgttggcgagtatgttaaatca
ggggggaacgaaaaggatgttgttatattcaatgcacttgaagtgacagactttagctcg
cagtatgggagtgagaccagcatatcttatacagcaagtaacctagctggccggggaaac
atctacccatcatatggtgacttcacacaggcctgcgtttttagaacgtatggtccatgg
tgggacatagtaccatctagtataaagtcattcaagagaacaccaccatcattctgtagt
caagattatatagagttgtcattccaaagaaaaatttatcctctaaagctagagatatat
gaaacctacaacccaggctgtgttgtgaaaattttagcttgtgaacgatctgaggacacc
gatgttgacacaggacatagtctaacacgctggaagactttatgggaaggggaaccaact
ttagctgggccaacttccagaatgttctgcccatcacttgaaaaatctccatttcccaca
gacttgattcgactggagttgtgtcataaactggtacattattacacagagctcgactat
gttgtgttgtatgggacaatatctcaagaagaagaagaagaaaaaacaatggtttattcc
cggtgtttggtgtctgataaagaaggggatcacatgacacaggtctccatggcaatgacg
caattcgaaaatttaaatatcggttcaaaatctggttccccgcccagatctgaagtctca
acaagtcaagagggatccagtcaagggaaatcaaaaacattagagatcttcagtaacaat
aaattagaaaaaggaagtgaatgttacgaacttggggaagtgaatgtactgggggaaatg
atatcacatggagaagtgaatcaacagataagtgaggagtttgaaccagaatctgacaat
ggattctttgatttattaccagaagaggttattcaggtaatcttgagttttctagatgtg
ttatcactatgcagagtggctagaagttcaaaattattatacaaacatagctacgactca
ctgcagtacacagaattgaacttacaacctcactggcctcaggtaaatgacattgcatta
gaaagtcttcataatagaagtaggtttcttcagagacttaacctgtcctggtgccatgga
aatattgtttctgaggactctttttgtagatatatcaaagcatgcggtcaaaatttacaa
gatctttatctatcctcatgcagttttgtgacacagatttctatacatgagatatctcaa
agttgtccgaatttgaaagagttggatataggtagttgtaaggagattgtaagcaatggt
ttttatgacatatcaaacctgaaacacctagaaagattaaacctttacagaactaatata
gaccaagatgcattactgcgtataattaggtcatgtacagaattaaagcatctgaattta
ggatcaacaaactgtgtccatgtttttgatgaaatacttttagcaataggtgaacataca
aaaaaattagtctcccttgatgcctggagatgtagaacagtttctaatgtaggggtttca
gcattagctgggggttgttcacatttagaggaactggatttaggatggtgctctgatgtc
aaatcttcaagttcatgccttatagaactagtgaaaaattgtccgaatttgaaaaagttg
tttctaactgccaacagaacggtttgtgatgctgacctactggcaatagctacatacagt
aaacacatggaacagttagacatccttggtaccaggcaagtcactgccgatgctgctcaa
aaggttttggaaaattgtgccaaaatgacattttttgatgtatcattctgctcagggata
gacaactataccgtggaacactggctgagagaatttcctcatgtggcaataaaaaaaagt
ttccaaaattag
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