Ruditapes philippinarum (Manila clam): 132752799
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Entry
132752799 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132752799 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132752799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132752799
04121 Ubiquitin system [BR:
rphi04121
]
132752799
Membrane trafficking [BR:
rphi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
132752799
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132752799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EML_2
F-box-like
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
F-box
Beta-prop_Nup120_160
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_like
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-TrCP_D
WD_LRWD1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
132752799
NCBI-ProteinID:
XP_060599165
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MASVEVQAATDNGLPSLARNGGRKKRIKGSTPPPPMNAEEIPWRGHGGRAPTMSSVEFDR
QLDKIAVWVEEWNHEQRCQIVEGILRRSNYNQFQFLNTSLQPILHRDFMYTARTQFPAIE
FQPVSTHTSRKLKEKLIYTRQDNYHRIKSAHLQDDTEVKQQIQEKESLRLPLLSRSNGVS
PVHSTEKQTAHLLTITPRKKPRRSPSLDKNNVDKWVGEGNPLYSSQPNLSRHSSIRYIDM
PIRRHIQDERSPRQGSHVTSATTTLSSNTGHSKSTCVSTVNRSLSTINNHRNAKLKQKNE
RGSELNLYSLSIPDEAITLFNWYSQNWSDVKRNEFLHKFMLKLDPRQHYFVSSFLAARQH
KDFISLLPKDISLKILHYLTVQDLLRCCMVSKTWNILANNNDLWKHKCECVKMEVPVTDQ
PEWKKLYKDNKYLRVNWNSAKCKITDFKGHSDSVICVIFDHVHLASGSLDKTIRVWNIKT
GKCLHVFKGHVKGVWCLNFFTHNLLISGSYDGTIRVWNLRTGKCNKTIIAHDGPIWALTR
HNEILVTVSQDKTAKVWDMNRCLHINSLLGHTAAIFAVDMSEDGHLVITGSADKSVKIWN
IETGRCLRWISVSQTTSIMSVSYSQGHLACSYGETICVYKVEGPTRLLKKYLDIVNEHQK
SELTKPKRIECLKLSILDKEKGEGIIVSAGKDGAVKYWDIKKDKSVQTFVGHRGREVNAI
YFDELRISSASVDNKIRIWDFNV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgttgaggttcaggccgctacagataatggattaccaagcttggcgcgtaat
ggtggtcgtaagaaaagaataaagggttcgactcccccacctccgatgaatgccgaggaa
attccgtggagaggacacgggggtcgtgccccaactatgagcagtgtggaatttgatagg
cagttagataagatagctgtatgggttgaagaatggaatcatgaacagagatgtcagata
gtagagggaatattacggcgcagtaattataaccagttccagttcctgaacacgtcactt
caaccgatcttgcaccgagacttcatgtacacagcacggacacaatttcctgctatagaa
ttccagcctgtcagtacacatacaagtagaaaattaaaggagaagctgatatatacgaga
caagataattatcacaggataaagagtgctcatttacaagatgatacagaagttaaacaa
cagatacaggaaaaagaatccttgagattacctctattgtcgagaagtaatggggtgtct
ccagtacacagtaccgaaaagcagacggcacatttgctcacaattactccaagaaagaaa
ccaagacggagcccgtctcttgacaagaataatgtcgacaaatgggtgggggaagggaac
cccttgtattcaagtcaacctaatctaagtcgtcacagttcaatcaggtacatagatatg
ccaatacgacgtcatatacaagatgagcgaagtccccgtcagggttcacatgttacatct
gctaccactacattgtcttcaaatacaggtcacagtaaatcaacgtgtgtgagcacagtc
aacaggtcattgagtacaataaataaccacagaaatgccaaactcaaacaaaagaatgag
agaggctctgaactaaatctgtactcactgtccattcctgatgaggccattactctgttc
aactggtactctcaaaactggtcagatgtgaagagaaatgaattcctgcacaagtttatg
ctgaaactagatccacggcaacattactttgtctcaagttttcttgctgctcgacagcat
aaagattttataagtttattaccgaaggatatatcactgaagattctacattatctgact
gtccaagatctgcttcgatgttgcatggtatcgaaaacgtggaacatattagccaacaac
aatgacctctggaaacataaatgtgaatgtgttaaaatggaagttcctgtcactgatcaa
ccggaatggaagaaactgtacaaagacaataaatatctacgagttaattggaacagtgcc
aaatgtaaaattacagatttcaagggacactcagatagcgttatatgtgttatatttgac
catgtacatctggctagtggtagccttgacaaaacaattagagtgtggaacataaagaca
ggcaaatgtctacacgttttcaaaggtcatgtgaagggcgtttggtgcttgaacttcttt
actcataatcttctaatcagtggatcttatgatggcaccatcagggtttggaatctcagg
actggcaagtgtaacaagacaattatagctcacgatggaccaatctgggcacttaccaga
cacaatgaaattctagtcactgtctcacaagataaaacggcaaaagtttgggacatgaac
agatgccttcacataaatagtttactgggtcacacagcagctatatttgcagtggacatg
agtgaagatggtcacctcgttataacagggtcggcagataagagtgtgaaaatctggaat
attgagactgggagatgtttacgttggataagtgtcagtcagacaacctctataatgtct
gtcagttacagtcaaggtcatctagcatgttcatatggcgaaacaatttgtgtgtacaaa
gttgaaggtccaacaagactcctgaaaaaatacttagatattgtgaatgaacaccagaaa
agtgaacttactaagccaaaaaggatagaatgtttgaaattgagtatattagataaagag
aaaggtgaaggcatcatagttagtgctggtaaagatggagctgtcaaatactgggatatc
aaaaaggataagagtgttcagacgtttgtggggcacaggggacgcgaggtaaatgctatc
tactttgacgaactccgaatttccagtgcctctgttgataataaaatccgaatatgggat
tttaatgtataa
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integrated database retrieval system
