KEGG   Ruditapes philippinarum (Manila clam): 132753198
Entry
132753198         CDS       T09557                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rphi03037]
    132753198
Cilium and associated proteins [BR:rphi03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   132753198
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40 Zn_ribbon_IFT122 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Zn_ribbon_IFT122_C Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd EIF3I TPR_IF140-IFT172 TPR_GEMI5 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 TPR_IFT80_172 PEP5_VPS11_N WD40_MABP1-WDR62_1st Beta-prop_IFT140_2nd Beta-prop_WDR35_TULP_N eIF2A Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_SPT8 zf-C3HC4_3 Beta-prop_WDR75_2nd RING_XB3-XBAT31 Peptidase_S51
Other DBs
NCBI-GeneID: 132753198
NCBI-ProteinID: XP_060599980
LinkDB
Position
Unknown
AA seq 1189 aa
MRAVPTWVDKVHDRDKQEQCIWALCFKPDGSQLIVAAGNRVLVYDTNDGTLIQPLKGHKE
AVHCVCYAKDGKRFASGSADKSVIIWTNKLEGILKYTHNDAIQCMAYNPVTHALASCAVT
DFGLWSPEQKSVSKHKVSSRVTACSWTNDGQYLALGLYNGLVSIRNKNGEEKVKIERPGA
TSSPIWSLEWNPSRDEAYDVLAVADWGQRLSFYQLSGKQIGKDRQLGHDPCFVRWFSKGE
YVVIGGSNKQCNLHTKEGVKLGTIGDQQSWVWAAAVRPDSNYVAVGCQDGTIAYYQLIFS
TVHGLYKDRYAYRDNMTDVIIQHLITDQKVRIKCRDLVKKIAIYRHRLAVQLPDKIVVYE
LYSDDAADMHYRVKDKINRKFECNLLVVCSQNIILCQDKRLQCYSFQGVKEKEWVMESLI
RYIKVIGGPPGREGLLVGLKNGQILKLFVDNPFPIVLLKQSTSVRCLDMSASRTRLAVVD
EHNTCLVYDINTKELLFQEPNANSVAWNTHYEDMLCFSGNGLLNIKASNFPVHQQKLQGF
VVGFSGSKIFCLHIYSMSSVDVPQSAPMYQYLEKKLFKDAYKVACLGVTDGDWETLAHEA
LEGLDFDTAKKAFIRIRDLRYLELIHNIEERKKRGENDNMVFLGDVYGYQGKFHEAAKLF
KKSGQEHKAMNMYTDLRMFDYAKEFIGSGDPMDKKMLITKQADWAKSSNEPKAAAEMYIS
AGEYVKAIEIIGDHGWSEMLIDLARKLDKADRESLSRCAHHLGKLEQYGYAAEVFSKMGD
HKSLIMLHVEAKHWEDAFTLVEKHPEYKEDVYVPYAQWLAENDRFEEAQQAFHKAGLQAE
AVKVLEQLTHNAVVESRFNDAGYYFWKLSIQCLDIAREEPDKSDEMLPKFYDFQRKADMY
YAYHSIQRYTDEPFTSHLPEALFNISRYLLHQMHDNIPHGISKAGTLYALAKQSKNLGAY
KLARYAYEKLQNTRVPPRFQEAVDLGSIIIRSKPFLDGEELLPMCYRCSTTNPLLNNGGS
QCINCKQPFVHSFVSFEVLPLVEFVLESGITDEEAIQILDLSIPKEKKEEKNWQESRMGN
MQSLRLGDEQEEEIEEEDPFSTKLMTFDQESTEFRPVIVNRNVLKTMSRADVYIRKWPKP
LRHQYFRSLLPDVTITMCPSCSKLFHTDDFELQYLQHGHCPFCRHKIES
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgagagcagttccaacttgggtggacaaagtccacgatagagacaagcaagaacaatgt
atttgggctttatgtttcaagccagatggaagtcagttgattgttgccgcaggaaacagg
gtacttgtatatgatacaaatgatgggacactgattcaaccattgaagggacataaagag
gctgtccactgtgtttgttatgctaaagatggtaagaggtttgcatctggatctgctgat
aaaagtgttattatctggaccaataaacttgaaggaatcctcaaatacacacacaatgat
gcaatacagtgtatggcatataatccagttacacatgccctagctagttgtgcagttact
gactttggtctttggtctcctgaacaaaaatcggtgtcaaaacacaaggtaagcagtaga
gtaactgcctgcagctggacaaatgatggacaatatttggccctaggactttacaatgga
cttgtcagcattagaaacaagaatggagaagagaaagtaaagatagaaagacctggtgcc
acctcatcacctatatggtcactggagtggaacccgtctagggatgaagcatatgatgtg
ctggctgttgctgactggggtcaaaggttatctttctatcagctctctggcaaacagatt
gggaaagacagacagctaggacatgacccatgttttgttcgctggttctccaagggggaa
tatgtagtaatcggaggttccaacaaacagtgtaatcttcatacaaaggaaggcgttaaa
ctaggaactattggcgatcagcagtcctgggtgtgggcagctgctgttagaccagactct
aattatgtggctgttggttgtcaggatggaactatagcgtactatcagctaatatttagt
acagtacacggtctatacaaggacaggtacgcatacagggacaacatgactgatgtcatt
atacagcatctgataacagaccagaaagtgagaatcaagtgtagagatctagtaaagaaa
atagctatatataggcacagactagctgtacaattaccagacaagattgtagtgtacgag
ttatactctgacgatgctgcagatatgcactacagggtcaaggacaagataaacaggaag
tttgaatgtaacctgcttgttgtctgctcgcaaaatatcatattgtgccaggataagcga
ttgcagtgttacagtttccagggagtgaaggagaaagaatgggtaatggagtcattgatt
agatatatcaaggtgataggaggacctccaggcagggaggggcttcttgtaggcctcaaa
aatggacaaatcctgaagttatttgtagacaacccgttccctatagtgctgttaaaacag
agcacgtctgtacgctgtctggacatgagtgccagtagaacacgtctagctgttgttgat
gaacacaacacgtgtttagtttatgatatcaacacaaaagagctcctattccaggaacct
aatgctaacagtgtggcatggaacactcactacgaggacatgttgtgtttctctggaaat
ggtttactgaatataaaagccagcaatttccctgtccatcaacagaaactacagggtttt
gtggtaggattcagtgggtccaagatattttgtctacatatctactccatgtcatctgtt
gatgttccacagtctgctccaatgtaccagtacctggagaaaaaactcttcaaggatgcc
tacaaggtagcatgtctgggtgtgacagacggtgactgggagactctcgcacatgaagct
ctcgaaggtctcgacttcgatactgccaagaaagcattcatcaggatccgtgacctgaga
tatctggagcttattcacaatattgaggagcgtaagaaacgtggtgagaatgacaatatg
gtgttcctcggagatgtttatggttaccaaggaaaattccatgaggcggcgaaattgttc
aagaaatctggacaagaacacaaggcaatgaacatgtatacagatctcagaatgtttgac
tatgcgaaggagtttattggttctggagatcctatggataagaaaatgttgataacaaaa
caagctgactgggcaaagagcagtaatgaacccaaggcagcagctgagatgtacattagt
gccggggaatatgtgaaggccatagagataattggtgatcacggatggtcggaaatgttg
atagatttagcgagaaaattagacaaggctgacagagagtcattatcacgatgtgcacat
cacctgggtaaactggaacaatatggttacgctgccgaggtgtttagtaaaatgggagat
cataaatcactgatcatgttgcatgtggaagctaaacactgggaagatgcatttaccctg
gtagaaaaacacccagaatacaaagaagatgtgtatgtaccatatgcccagtggttggca
gaaaatgacagatttgaagaggctcaacaagcattccacaaggcaggcctacaagcggag
gcagtgaaagttttagaacagttaacacacaatgcagtggtagagagtagatttaatgat
gcaggctactatttctggaaactctccatacagtgcttagatatagctagagaagaacca
gacaagagtgacgagatgttgcccaaattttatgatttccagaggaaagccgacatgtat
tatgcttaccattccattcagagatacacagatgagccgtttacgtcacatcttccggag
gcgttgtttaacatttcacgttacttgttacatcagatgcatgataacattccacatggt
atttctaaagctggcacattatatgcactagcaaagcagagtaaaaacctaggggcgtat
aaactagctcgatatgcctacgagaaactacagaacactcgagttccaccaaggttccag
gaggcagtagatctagggagtatcattatcagatctaagcccttcttagatggggaggag
ttgttgccgatgtgttacagatgttcgacgactaatccactactgaataatggaggtagt
cagtgtatcaactgtaaacaaccgttcgtacattcctttgtctcctttgaggtgttaccc
ctggttgagtttgtgttagaaagtggtataacagatgaggaggccatacagattctagat
ctttctatacctaaagaaaagaaagaggagaaaaattggcaggaatctagaatgggcaat
atgcagtcactgagacttggtgatgaacaggaggaagagattgaagaagaggatcctttc
tctactaaactgatgacctttgatcaagagagtacagagttcagacctgtgattgtaaat
cgtaacgtgttaaagacgatgtctcgagcagacgtttacatcagaaaatggccgaaacca
ctgcgccatcaatatttcagatcgctgttaccagatgtgacgataacaatgtgtcctagt
tgttcaaagttgttccacacagatgattttgaactacagtatttacaacatggtcactgc
ccgttctgcaggcacaaaattgaatcctag

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