Ruditapes philippinarum (Manila clam): 132754670
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Entry
132754670 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132754670
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132754670
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132754670
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132754670
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132754670
Peptidases and inhibitors [BR:
rphi01002
]
Peptidase inhibitors
Family I32: IAP family
132754670
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132754670
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
132754670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
Sigma70_r3
UBA_2
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
132754670
NCBI-ProteinID:
XP_060601310
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MTTDMNDNYPQQVSDDQAKSERSKMVLSTGISLPANFHCDSRFVLGGRKQTSHGLNSFGL
NPLNTYVSQAQQSRQGNEVRSSTIRLRSIISNNPVITRPPRHPDYVDSSERRPSYARWLH
RKQILTDAGFFYTRRQIDSFLNRPAHTMTPPQVLEAIVFYQRLEATGFYDTGRHRQGPAT
AVCRQPGYQTLESGPASCLNWPLHMMQTPEQLEDDILYQRLKATDFSDTERHRQDSANAV
YRHPEYQTFESRLASFRNWPPHIIQTPQQLAKAGFYHTGHGDGVRCFACDGGLQHWEPED
DPWIEHCRWFTACPFARIQKGDRFIELVQTYKNQLEAFTENGMSLRLEALKLRDPELQDA
MDGRKAVCKKMGYLTKEINEAIKELREKGTRNPSIEEIIDVMEVIKRRKMLQAVANETPA
EENQRQNKTNCHRECMECGEPLSRCKVCGEVNRKKIQIIKIEWI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgatatgaacgacaattaccctcagcaagtatcagatgatcaagccaagtct
gagagaagtaaaatggtattatcaactggtatttcacttccggcaaattttcactgtgac
tcaagatttgttttaggtgggcgtaaacaaacgtcacatggactgaacagtttcggttta
aacccactaaatacatatgtcagccaagctcaacaaagcagacagggaaatgaagtccgt
tcttcaacaataagattaagaagtatcatttcaaacaaccctgtcattacaaggccacct
aggcaccccgactatgttgatagtagcgaaaggcgtccatcttatgctaggtggttgcat
cgaaaacaaatattgaccgatgctggattcttctatacaaggagacaaattgattcattc
ctgaataggccggcacacacgatgacccctccacaggtactagaagctatagttttttat
caaaggttagaagcaactggattttatgacacagggagacacagacagggtccagcaacc
gctgtgtgccgtcagcctggataccagacattggagtcaggacctgcttcatgcctgaat
tggccactacacatgatgcagacccctgaacagttagaagacgatatattatatcaaaga
ttgaaagcaactgactttagtgacacagagagacacagacaggattcagcaaatgctgtg
taccgtcaccctgaataccagacatttgagtcacggctggcttctttcaggaattggcca
ccacacataatacagacccctcaacagttagcaaaagctggattttatcacacaggtcat
ggagacggtgtgcgttgttttgcctgtgatggtggactacaacactgggaaccggaggat
gatccatggatcgaacactgtagatggttcactgcttgtccgtttgcaagaatccagaaa
ggcgatcgtttcatagaactcgttcagacatataaaaatcagctggaagcctttactgaa
aatggtatgtcgcttcgtctagaggcattgaaactaagagatcctgaattgcaagatgca
atggatggacgtaaagctgtttgtaaaaaaatgggatacctgacaaaggaaatcaatgaa
gctattaaggaattaagagagaaaggaacaagaaatccttcaattgaagagataattgat
gtgatggaagtaattaaaaggaggaaaatgttacaggctgtagcaaatgagacaccagct
gaagaaaaccaacgtcagaacaagacaaactgccatcgtgaatgcatggagtgtggagaa
ccactgtcaaggtgtaaagtttgcggtgaagttaaccgtaagaagatccaaatcatcaaa
atagaatggatttaa
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