Ruditapes philippinarum (Manila clam): 132757366
Help
Entry
132757366 CDS
T09557
Name
(RefSeq) nuclear hormone receptor HR96-like isoform X1
KO
K08536
liver X receptor alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132757366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132757366
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rphi03310
]
132757366
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132757366
Nuclear receptors [BR:
rphi03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
132757366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
132757366
NCBI-ProteinID:
XP_060604603
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MDKIPITGSSTTDSGTLDLQDDKLDIDGSVYLCEQTLKMTSLSVYENMDIKSEPAAPVIG
TSLSSSCYMNTMFLGGNIESKDDRGPSLGYWDRYQPLSSFEDSNSNGYGDGIPNPYRPMD
LRPDYNGIEPMHKSRKNKEDKYCGVCGDRALGYNFDAISCESCKAFFRRNAPKGLDYFKC
PYEEKCKMDVSNRRFCKRCRLRKCFEIGMRKEYILTEEEKMRKKQRIDDNRYGRMRDLEK
KMSQSGVVTSSSTQKLRPLEPAEEAVINEIVQAYRASLSIPIESKVPRDNANFAALVNIA
EVSVRRVVDMAKKLKAFKALSQTDQIGLLKGGSIELLILRSVISFDKENNYFLDPYDKDS
LAMSADQLREGIEKPGVEGLEGMPGLPGFNQGGGLFDEHMKFVKSLAIDLKADETVLILL
LMLSLFSPDRPCVQDKVYISAEQDKYALLLQRYLESKYPSHVVRSIYPKLLMKLTDIRNL
NEEHSQVLLKLNPEGIQPLMKEVMDLHLKKSETDSDSSSVASP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattccaatcactggttccagcactacagacagtggcacactggatttacaa
gacgataagctggatatagatggcagtgtgtacctgtgtgagcagacccttaagatgacc
agcctcagtgtatatgaaaacatggatataaagtcagaaccagcggctcctgttataggc
acaagtctgtcttcgtcgtgttacatgaacaccatgttcctcggtggtaatattgaaagt
aaagatgataggggaccgtccctcggatattgggaccgataccaacctttgtcaagtttt
gaggactcgaacagtaacgggtatggagacggaattcccaacccgtacagacccatggac
ctgagaccagattacaatggcattgaaccaatgcataaaagtcgtaaaaataaggaggac
aaatactgtggggtttgtggggaccgagctcttggatacaactttgacgctatttcatgt
gaatcatgtaaagctttcttcagacgaaatgctcctaaaggcctggattactttaagtgc
ccttatgaagagaaatgtaagatggacgtctccaacagaagattctgtaagagatgtcgg
ttgaggaaatgttttgagattggtatgcgtaaagaatatatcctcactgaggaggagaag
atgcggaagaaacaacgaattgacgacaacaggtatggacggatgagagacctcgaaaag
aaaatgtcacagtctggggtcgtcacatcgtcatcaacacagaagctccgacccttggaa
cccgcagaagaagccgtaataaatgaaattgttcaggcttaccgcgcatctctgtctata
cccatcgagtcaaaggttccgagagataatgccaattttgccgcgctagttaatatcgct
gaagtgagtgtacgtagggtagtggatatggccaaaaaattgaaagcttttaaggcttta
tcacagactgaccagattggtttattaaagggaggaagtatagaattgctcattcttaga
tctgttatctcattcgataaggaaaacaattattttctagatccttatgataaggactct
ttggccatgtcagctgatcagcttagggagggcatcgagaaaccgggagtcgaaggtctc
gagggcatgccaggtttgccaggattcaatcaaggtggcggactctttgacgagcatatg
aaatttgtcaaatcgttagcgatagacttgaaagccgatgagacagtgttgatattacta
ctaatgttgtcactgttctcgcccgatcgtccctgtgtacaggataaagtgtacatatcc
gcagagcaggataaatacgcgctcttacttcaaaggtatctcgaatccaaatacccaagt
cacgtagttcgtagcatctacccaaagcttttgatgaagctaacagatattcgcaacttg
aatgaggaacattcgcaagttttgttgaaactgaatcccgaaggtattcagccattgatg
aaggaagttatggacttgcacctgaaaaaatcggaaacagatagtgattcgtcatcagtt
gcatcgccatag
DBGET
integrated database retrieval system
