Ruditapes philippinarum (Manila clam): 132757717 Help Entry 132757717         CDS       T09557                                  Name (RefSeq) TAR DNA-binding protein 43-like   KO K23600   TAR DNA-binding protein 43 Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     132757717  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rphi03019]     132757717 Messenger RNA biogenesis [BR:rphi03019]  Eukaryotic type   mRNA processing factors    3' end processing     Negative regulators of mRNA 3' end processing      132757717 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TDP-43_N RRM_1 RRM_PARP14_3 RRM_7 RL RRM_3 TDP-43_C Motif Other DBs NCBI-GeneID:  132757717 NCBI-ProteinID:  XP_060605067 LinkDB All DBs Position Unknown AA seq 416 aa AA seqDB search MPQYIQVTDDENEEAVEIPSEEDGTLLLSTISGQFPNACGLKYRNPQTGNFRGIRLSDNK LHPPDNGWKNHTYLVVFPKDKKKGAVGEDISLKTSLSEKKCSDLIVLGLPWKSSEEDLRN YFSKFGELLLVQVKRDQKTSQSKGYGFIRFHKYEDQMKCMSQRHNIDGRWCDVTIPNSNE GAHQMINRKVFIARCTEDITSDDLRNYFCQYGEVVDVFIPKPFRSFAFVTFSDPEVAHSL CGEDHIVKGVSVHVSYAAPKGTDRFGDKKVQPGVQNGPVQQRGGNYTQLVNHQGTWQPHK NNQIAKPMGFPPNMPPQDMNAVGINLFNSAMMAAAQAMLQGQGGNWAHMTPPPGPPPQHH QPVASGDAGVPQTAGHVYAAPQTSTAWGWGGHHATEPQPGSYAGWSASNRQQQGWS NT seq 1251 nt NT seq  +upstreamnt  +downstreamnt atgcctcaatatattcaggtaacagacgacgaaaatgaagaggctgttgaaatcccaagt gaagaggatggtactcttctacttagcacaatatccggacagtttcccaacgcctgtgga ttgaagtacagaaacccacaaactggaaatttccgagggatacgcctaagtgataacaag ctccacccaccagacaacggctggaaaaatcatacatacctcgttgtttttccaaaagac aagaagaaaggagctgtaggcgaagatataagcttaaagactagtctcagtgaaaagaaa tgtagtgacctcatcgtgttagggctaccttggaagagttctgaggaagacctaagaaat tacttctcaaagtttggtgaactcctgcttgtacaggtgaaacgagatcaaaaaacaagc caatcgaaaggctacgggtttatacgtttccataagtatgaagatcaaatgaaatgtatg tcccagcgacacaacattgatggtagatggtgcgatgttaccattccaaactcaaatgaa ggtgcacaccaaatgatcaaccgtaaagtgttcattgctagatgtacagaagatatcaca tcagacgatctcaggaattatttctgtcagtatggcgaggtggtagacgttttcatcccg aaaccattccgatcatttgcgtttgtcacattttcggaccctgaagttgctcacagtctt tgtggggaagatcatatagtaaaaggtgtaagtgtccatgtgagttatgcggcaccaaaa ggaacagaccgatttggagacaagaaggttcagccaggagttcaaaatggccctgttcaa caaaggggaggtaactatacacagttggtgaatcatcaggggacttggcagccacacaaa aataaccagattgcaaaaccaatgggcttccctccaaacatgccaccacaggatatgaat gctgttggtattaacctattcaattctgcgatgatggcagctgcacaagccatgctgcag ggtcagggtggtaactgggcacatatgactcctccccctggcccgcctccgcaacatcat cagcctgtagcctcgggtgatgcaggggttcctcaaactgcaggtcatgtttacgctgca ccacagaccagtacagcctggggatggggtggacatcatgcgactgagcctcagcctggg agttacgctggttggagtgcttccaacagacagcagcaggggtggagctaa

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