Rickettsia peacockii: RPR_02085
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Entry
RPR_02085 CDS
T00907
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rpk
Rickettsia peacockii
Pathway
rpk00020
Citrate cycle (TCA cycle)
rpk00785
Lipoic acid metabolism
rpk01100
Metabolic pathways
rpk01110
Biosynthesis of secondary metabolites
rpk01120
Microbial metabolism in diverse environments
rpk01200
Carbon metabolism
rpk01210
2-Oxocarboxylic acid metabolism
Module
rpk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RPR_02085 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RPR_02085 (kgd)
Enzymes [BR:
rpk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RPR_02085 (kgd)
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Gene cluster
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Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
DUF3994
Motif
Other DBs
NCBI-ProteinID:
ACR47266
UniProt:
C4K115
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All DBs
Position
343065..345851
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AA seq
928 aa
AA seq
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MEEDFKKTGYLFGGNAVFIEELYKQYLANPASVDQTWQEFFAGIKDNNTLLNKSTAKIII
PDEIKKESLNNNLSSEDLNSLKAKEMINAYRKHAHYLANLDPLGLELRKTKNDLKLNIET
FGLDSSQLEENINITDEFVGTWNCKLSELVTKFDKVYTGSIGVEFEQIENVAGKNWLYNK
LESEVTFSSEDKKTILNDLVEVEGFEQYLHTKFPGAKRFSIEGGDASIVAMSKAIDLSMH
QGVSEIVIGMAHRGRLNTLTKVVGKPYKAVIAGFISGSVFPDELNVSGDVKYHLGYSSDR
TLEDKKIHLSLADNPSHLEAVNPIVAGKVRAKQDILGDTKRSKVKAILVHGDAAFCGQGV
VAESLSMSPLAAYDIGGILHFVINNQLGFTANAANTRASRYSTEFAKIIAAPILHVNGDD
IEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNEGDEPMYTQGKMYNIIKNKLTPGNI
YANELVKSGVIDNNYFAKLKEEFKAKLDKEYEQAKSYKQEAHFLGGLWQGISRTRTQATI
TGISKKTLHDLGTKLCEIPKDFAVNPKLVKLFEARKATLTADQPIDWATAEQLAFASLLA
SGTNIRLTGQDSGRGTFSHRHSVLHNQIDGTTYIPLNNLSKEQAKYEVADSNLSEYAVLG
FEYGYSLANPKNLVLWEAQFGDFANGAQIIFDQFISSSETKWLRMSGLVVLLPHAFEGQG
PEHSSARLERFLQLAAENNMYVTYPTTPASIFHLLRRQILDDTRKPLIVMSPKSLLRHKY
AVSKLDELGENTTFLPVLDEVTKVDTNNITKVILCSGKVYYDLFEMRGNNSNIAIIRLEQ
LYPFEKKLVASLLKKYNRTQELIWCQEEPKNMGTWCYIVSHLNDALKEAGIKNEFKYVGR
EESASPAVGSLQAHNKQQEKLLRTALGI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagactttaaaaaaacaggttatttatttggcgggaatgctgtttttattgaa
gagctatataagcaatatctagccaaccctgcctcggttgatcaaacttggcaagaattt
tttgccggcattaaggataataatactttactcaataaaagtacggcaaaaataattatc
cctgatgaaataaaaaaagaatcgttaaataataatttatcttctgaagacttaaatagt
ttaaaagctaaggaaatgatcaatgcttatcgcaagcatgctcactatttagcgaatctt
gatccgcttggtcttgagctacgtaaaacaaaaaatgatttaaagcttaatatagaaact
tttggtcttgatagcagtcagctagaagaaaatatcaatattacggatgaatttgtcggt
acttggaactgtaaattatctgaattagtgaccaagttcgataaagtttatacaggttct
ataggtgtagagtttgagcaaatagaaaatgtagcaggaaaaaactggttatataataag
ctagaaagcgaagttacgttttcttctgaagacaaaaaaactatcttaaatgatttagta
gaagtagaagggtttgagcagtatttacatacaaaatttcccggagctaagcgtttttcc
attgagggtggtgatgcttctatagttgctatgagtaaagctatagatttatccatgcat
cagggcgtctcagaaatcgttatcggtatggcacatcgagggagattaaacactctaact
aaagtagtaggtaagccatataaagccgttattgcgggcttcataagcggcagcgtattt
cctgatgagctaaatgtttcaggcgatgtaaaataccatttaggctattcgtccgataga
actctagaggataagaaaatacacttgtcgctagccgataacccttcacatttagaagcg
gtaaatcctatagttgcaggaaaagtaagagcaaagcaagatattcttggagatactaaa
cgcagcaaagtcaaagctattttagtacatggcgatgctgctttttgcggtcagggcgtg
gttgccgagagtctatcaatgtcacctttagctgcttatgatatcggcgggatattgcat
ttcgtcattaataatcagttaggttttacggctaatgctgcaaatactagagctagtaga
tattctacggagtttgctaaaatcatagctgccccgattctacacgttaacggtgacgat
atagaagcagtgttaaaagccaccaatattgcggtagaatacaggcagaaatttggtaag
gatgttgtagtagaaattatttgttaccgtaaatatgggcataatgagggcgatgagccg
atgtatactcaaggcaagatgtataacattattaaaaacaaactgacccctggaaatatt
tacgcaaatgagttagtaaaaagcggtgtaatcgacaataattattttgctaagttaaaa
gaagaatttaaagcaaaactagataaggaatatgagcaggcaaaaagttataagcaagaa
gcacatttcttaggcggattatggcaaggtatttctcgtactcgtacacaagctacaata
acgggtatcagtaaaaaaacattacacgatttaggcactaaactatgcgaaataccgaaa
gattttgccgttaatccaaaacttgtaaaactatttgaagctcgaaaagccactctaaca
gctgatcaacctattgattgggcgacggcagagcagctagcttttgcaagcttgcttgct
tcaggcacaaatataaggctaaccggacaagattcgggacgcggtactttctcgcatcgt
cattcagtattgcacaaccaaattgatggtactacctatatacctctaaataatttatct
aaagaacaagcaaaatacgaggtagccgatagtaatttatctgaatatgcggtgcttggt
tttgagtatggttattcactcgcaaacccaaaaaatttagttttatgggaagcacaattc
ggtgattttgctaatggagctcagattatttttgaccagtttatttcaagcagcgaaact
aaatggcttcgtatgagcgggcttgtggttttgttacctcatgcatttgagggacaagga
ccggagcatagttcggcaagacttgagaggttcttacaactggcggctgagaataatatg
tatgttacataccctactacccctgcttcgattttccatctgctacgtcgccaaatactt
gatgatacccgtaaaccgttaatcgtaatgtcgccgaaatcattattacgtcataaatat
gccgtatctaaacttgacgagctaggtgaaaatactactttcttaccagttttagatgaa
gtaactaaagtagatacaaacaatattactaaagtaattttatgcagcggtaaggtatat
tacgatctatttgaaatgcgtggcaataacagtaatatagcgattattaggcttgagcaa
ttatacccttttgaaaaaaaacttgtagcatcgctattaaaaaaatataataggacgcag
gaattgatttggtgtcaggaagaaccaaagaatatgggaacttggtgttatatagtttct
cacttaaacgatgctttaaaagaagcaggaattaaaaatgaatttaaatatgtaggtaga
gaggaatcagcctctccagcagtaggctcgctgcaagcacataataaacagcaagagaaa
ctattaaggacagcattgggaatatga
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