KEGG   Rickettsia prowazekii NMRC Madrid E: H374_3020
Entry
H374_3020         CDS       T02544                                 
Name
(GenBank) Ribosomal RNA small subunit methyltransferase I
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rpn  Rickettsia prowazekii NMRC Madrid E
Pathway
rpn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    H374_3020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpn03400]
    H374_3020
Enzymes [BR:rpn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     H374_3020
DNA repair and recombination proteins [BR:rpn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     H374_3020
 Prokaryotic type
     H374_3020
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH RecR_HhH UCR_UQCRX_QCR9 HHH_5
Other DBs
NCBI-GeneID: 15150074
NCBI-ProteinID: AGJ01590
LinkDB
Position
complement(361075..361713)
AA seq 212 aa
MQAQIMNKIFEIFSKNNPKPQTELIYKNDFTLLVAVILSARATDISVNLATKHLFETYNT
PEKFLELGEEGLKKYIKSIGLFNSKAKNIIALCQILIKNYQTSIPNNFKELVKLPGVGRK
TANVVLNCLFAMPTMAVDTHVFRVSKRIGLAKGNTAAIVEKELLQIIDEKWLTYAHHWLI
LHGRYICKARKPGCNICPIKEYCEYYINTFSS
NT seq 639 nt   +upstreamnt  +downstreamnt
atgcaagcacaaataatgaataaaatttttgagatttttagcaaaaataatccaaagcca
caaactgaattaatatataagaatgacttcaccttattagttgcggtaatattatcggcg
cgcgcgaccgatatatcagtaaatttagcgactaaacacttatttgaaacttataataca
ccagaaaaatttttagaactaggtgaagaagggcttaaaaaatatataaaatctataggg
ttatttaatagcaaagcaaaaaatattatcgcattatgtcaaatattgataaaaaattat
caaacttcaataccaaataattttaaggaattagttaaactaccaggtgttggaaggaaa
actgcgaacgttgtactaaattgcctatttgctatgcctacaatggcagttgatacacat
gtttttagagtatccaaaaggattggactcgcgaaaggcaatactgctgcaatagtagaa
aaagagctgttacaaattatcgacgagaaatggctaacatatgcacatcactggttaatt
ctacatggaagatatatttgtaaagctagaaaacctggttgtaacatctgccctattaaa
gaatattgtgaatattatatcaatacattttcaagttaa

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