Rodentibacter pneumotropicus: NCTC8284_02403
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Entry
NCTC8284_02403 CDS
T05800
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC8284_02403 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpne03400
]
NCTC8284_02403 (nth)
Enzymes [BR:
rpne01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC8284_02403 (nth)
DNA repair and recombination proteins [BR:
rpne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC8284_02403 (nth)
Prokaryotic type
NCTC8284_02403 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
VEH67217
UniProt:
A0A3S4XUB7
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All DBs
Position
1:1456554..1457198
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AA seq
214 aa
AA seq
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MNKKKRVEILTRLRDQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVANT
PQAILDLGLDGLKSYIKTIGLYNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGRK
TANVVLNTAFGHPTIAVDTHIFRVCNRTNFAPGKDVVKVEEKLLKVVPDEFKVDVHHWLI
LHGRYTCVARKPRCGSCIIEDLCEYKEKPNIKNN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagaaaagagttgaaatattgacccgattgcgggatcaaaatccccaccct
accaccgaattacagtataattcgccttttgaattattaatcgccgtgattttatcggca
caagccacggataaaggggtaaataaagcgacagaaaaactttttcctgttgccaatacg
ccgcaagcgattttggatttaggcttagatggtctaaaaagctatatcaaaaccatcgga
ctctataatagtaaggctgaaaatatcatcaaaacctgccgcgatctcatcgaaaaacac
aacggtgaagtacctgaaaatcgtgaagccttagaagcccttgccggtgttgggcggaaa
acggctaacgtagtgctaaataccgcctttggtcatcccactattgctgtcgatacccat
atatttcgggtatgcaatcgcactaattttgcccccggtaaagatgttgtaaaagtggaa
gaaaaactcttaaaagtagtgcctgatgaatttaaagtggatgtgcaccattggctcatt
ttacatggtcgctatacttgtgtggcaagaaagccccgctgcggttcctgcattatcgaa
gatctctgcgaatataaagaaaaaccgaatattaaaaataattaa
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