Rhodophyticola porphyridii: ABWH90_04095
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Entry
ABWH90_04095 CDS
T11241
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh00300
Lysine biosynthesis
rpoh00550
Peptidoglycan biosynthesis
rpoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABWH90_04095
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABWH90_04095
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
ABWH90_04095
Enzymes [BR:
rpoh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ABWH90_04095
Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
Precursor biosynthesis
Amino acid ligase
ABWH90_04095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
XHC07432
LinkDB
All DBs
Position
803961..805439
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AA seq
492 aa
AA seq
DB search
MAPGVKTLSALGLTPTRGGDVSVSGLSLDSRAVKPGHLFAALPGTRVHGAEFIQYAVRMQ
AGVILTDREGAEIAAEHLRDVGVVLAEDPRAVFAHACALWFGAQPETMVAVTGTNGKTSV
ASFTRQIWAALGIETASIGTTGVEGAFTAPGIHTTPDALTLHQLLADMAAADVQHVAMEA
SSHGLDQRRMEAVHLAAAAFTNLTQDHLDYHGTMEAYFHAKLRLFTELLPEEGTAVVNLD
DPRGADVVAACAARDIEAITIGQYAEDARMKITGRRLDEAGQDVLFRWQGQQYQTRLELI
GGFQAMNVLTAAGLVIAGGADAEMVFGVLSRLQGVRGRMQLAARRSFGAPVYVDYSHTPD
SLETALKALRPHVLGRLIVVFGAGGDRDRGKRPLMGQAAAENADVLIVTDDNPRSEDPAA
IRAAILQACPEASEVGDRAEAILRGVDALQPGDALLIAGKGHETGQIVGDVVYPFDDVEQ
ASVAVAALEGRV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaggagtgaagacactatctgcgcttggcttgacgcccacccggggcggcgac
gtgtcggtcagcgggctcagccttgacagccgtgcggtcaagccggggcatctgttcgcg
gccttgcccggcacgcgggtccatggcgccgagttcatccagtatgcggtgcgcatgcag
gcgggtgtcatcctgaccgaccgggagggggcggagatcgccgccgaacatctgcgcgac
gtcggtgtggttctggccgaggatccgcgcgcggtctttgcccatgcctgcgccctgtgg
ttcggggcgcagcccgaaacgatggttgccgtcaccggcaccaacggcaagacgagcgtg
gccagtttcacccgccagatctgggccgccctgggcatcgagacggcaagcatcgggacc
accggagtggaaggcgcgttcaccgcgccgggcatccacaccacgcccgacgcgctgacg
ctgcatcagttgctggccgatatggccgccgccgacgtgcagcacgtggcgatggaggcg
tcgtcccacgggctggaccagcgccggatggaggcggtgcatctggccgccgccgccttc
accaacctgacccaggaccatctggattatcacggcacgatggaggcgtattttcacgcc
aagcttcgcctgttcaccgagcttctgcccgaagagggcacggcggtcgtcaatctcgac
gatccgcgcggcgccgatgtggtcgccgcctgtgcggcgcgcgatatcgaggcgatcacc
atcggccaatatgccgaagacgcccggatgaagatcaccgggcgccgcctggacgaagcc
gggcaggatgtcctgtttcgctggcaggggcagcaatatcagacccggctggagctgatc
ggcggatttcaggcgatgaatgtgctgacggccgcggggcttgtcatcgcgggtggcgcc
gatgcggagatggtgttcggcgtgctctccaggcttcagggcgtgcgcggccggatgcaa
ctggcggcccggcgcagtttcggcgcaccggtctacgtggactactcccatacgcccgac
tcgctggaaacggcgctgaaagcgcttcgcccgcatgtgctcggtcgcctgatcgtggtc
ttcggcgcgggcggcgaccgggatcgcggcaagcgcccgctgatggggcaggcggcggcg
gaaaacgccgatgttctgatcgtgacggatgacaaccccagatccgaggatcccgccgcg
atccgtgccgcaatcctgcaggcctgcccggaggcgtcggaggtcggcgaccgggcggag
gcgatcctgcgcggcgtcgacgcgctgcagcccggagatgcgcttctgattgcgggcaag
ggccatgaaaccggccagatcgtgggcgatgtggtctatccctttgacgatgtggagcag
gcgagtgtcgccgttgcggcgctggaggggcgggtatga
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