KEGG   Rhodophyticola porphyridii: ABWH90_19330
Entry
ABWH90_19330      CDS       T11241                                 
Name
(GenBank) endonuclease
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rpoh  Rhodophyticola porphyridii
Pathway
rpoh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpoh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ABWH90_19330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpoh03400]
    ABWH90_19330
Enzymes [BR:rpoh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ABWH90_19330
DNA repair and recombination proteins [BR:rpoh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ABWH90_19330
 Prokaryotic type
     ABWH90_19330
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH HTH_5 EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: XHC06652
LinkDB
Position
3885128..3885862
AA seq 244 aa
MQLLLNLDDRTHELTDIHQRLKRHFGLQGPYRALDPVSQLVMALIGGKTRGEVSLSAFEG
LVARFGHWEAVRDAPVAEIYEVICGVTFAELKAPRLKASLLAVTRAHGALTLSPLEDMAV
GDALAWLERLPGVGRKVAAATLNFSTLRKAALVIDSHHLRVLRRLGYVGPRTGIAQAYDL
VMPLLPESWTARDFDQHHQLMKVLGQEICRNGVPICERCPLRSVCATAQRDGRRRHDAGQ
RRQA
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcaactcttgcttaaccttgatgatcgaacccatgagctgacggatatccaccagcgt
ctgaagcggcatttcggcctgcaagggccctatcgggcgctcgatccggtcagtcagctg
gtgatggctcttatcggaggaaagacccggggcgaggtttcgctgtccgctttcgaaggt
cttgtcgcccggttcgggcattgggaggctgtgagggacgcgcccgttgccgaaatctat
gaggtaatctgcggggtcactttcgcggaactcaaggcgccgcgcctcaaggcatcgctt
ctggcggtgacccgggcccatggtgcactcacgctctcacctctcgaagacatggctgtc
ggcgacgcgcttgcatggctggaacgtctgcctggcgtggggcggaaggtcgcggctgca
acactcaacttcagcacattgcgcaaggcggctctggtcatagattcgcaccatttgcgg
gtgcttcggcggcttggatatgtcggcccgcggaccggcatcgcgcaggcctatgacctt
gtcatgccgctgctgcccgagagctggaccgcgagggatttcgatcagcatcaccagctc
atgaaggttcttggtcaggagatttgccgaaacggcgttccgatctgcgagcgttgcccg
ctccggtctgtctgcgcgacggcgcagcgcgatggccgacgccgtcatgatgcggggcaa
cggcggcaggcgtga

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