Rhodococcus pseudokoreensis: JWS13_40305
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Entry
JWS13_40305 CDS
T08508
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00860
Porphyrin metabolism
rpsk01100
Metabolic pathways
rpsk01240
Biosynthesis of cofactors
rpsk03030
DNA replication
Module
rpsk_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JWS13_40305
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWS13_40305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpsk03032
]
JWS13_40305
Enzymes [BR:
rpsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
JWS13_40305
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
JWS13_40305
DNA replication proteins [BR:
rpsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
JWS13_40305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
DUF5969
Motif
Other DBs
NCBI-ProteinID:
QSE94411
LinkDB
All DBs
Position
7679892..7680995
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AA seq
367 aa
AA seq
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MSVGRVVVEADGGSRGNPGPAGYGTVVFAAADGAVLAERKESLGTVTNNVAEYRGLIAGL
EAAAELGASGVDVRMDSKLVVEQMSGRWKVKHPDMIPLQRRASELARQFGSVTYTWIPRA
ENAHADRLANEAMDGAAGTVAEPEPAAAASDDATPAAPGWMDTTGAPTRMLLLRHGQTVL
SVDRRYSGRGNPALTEIGQAQANGAASRFAGNDGIAAVVSSPLGRAQQTAAAAAKVLGLP
VTVHEGLTETDFGEWEGLTFREAADRDPELHRKWLSDTSVRPPAGESFDEVRERIVKVRD
DLTATYGGSTILVVTHVTPIKTLLQLALDAGPSLLYRLHLDLASLSIAEFYPDGGSSVRL
VNDTSHL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcggtcgcgtcgtcgtcgaggccgacggtgggtcgcgcggcaatcccggaccc
gcgggctacggcaccgtggtgttcgccgctgccgacggcgccgtcctcgccgagcgcaag
gaaagcctcggcaccgtcacgaacaacgtcgccgaataccgggggctgatcgccgggctc
gaggccgccgccgaactcggtgcgtccggggtggacgtgcggatggactccaagctggtg
gtcgagcagatgtccgggcgctggaaggtcaaacacccggacatgattccgctgcagcgc
cgggcgtcggaactcgcccggcagttcggttccgtgacgtacacctggattccgcgggcc
gagaacgctcacgccgaccgcctcgccaacgaggccatggacggcgccgccggtaccgtt
gccgaacctgaaccggctgccgcggcgtcggacgacgccaccccggcggcgccgggctgg
atggacacgacgggcgccccgacccggatgctgctgctccggcacgggcagaccgtgctg
tccgtcgaccggcggtactcgggtcgcgggaacccggcgctcaccgagatcgggcaggcc
caggcgaacggcgcggcctcccgcttcgcgggcaacgacggcatcgcggcagtggtgtcg
tccccgctggggcgcgcgcagcagaccgcggcggccgcggcgaaggtgctcgggctcccg
gtcaccgtgcacgagggcctcaccgaaaccgacttcggcgagtgggagggcctcacgttc
cgggaggccgccgaccgcgaccccgaactgcaccgcaagtggttgtcggacacgtcggtg
cgaccgccggcgggggagagcttcgacgaggtccgggagcggatcgtgaaggtccgagac
gacctcaccgccacctacggcggctccacgatcctcgtcgtcacgcacgtgaccccgatc
aagacgctgctgcaactggcactcgacgcgggaccgtcgctgctgtaccggctgcacctg
gatctggcgtcgctgagcatcgcggagttctaccccgacggcggctcgtccgtccgcctg
gtcaacgacacctcccacctgtga
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