Rhodococcus pseudokoreensis: JWS13_40745
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Entry
JWS13_40745 CDS
T08508
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00300
Lysine biosynthesis
rpsk00550
Peptidoglycan biosynthesis
rpsk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWS13_40745
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JWS13_40745
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpsk01011
]
JWS13_40745
Enzymes [BR:
rpsk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JWS13_40745
Peptidoglycan biosynthesis and degradation proteins [BR:
rpsk01011
]
Precursor biosynthesis
Amino acid ligase
JWS13_40745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QSE94492
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Position
7771083..7772696
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AA seq
537 aa
AA seq
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MPVPSRPQSASVEVKVTDGLRPAQPVRTTVSALAALAGARVEAPTGTAEHVIVTGVDLRA
QGIVEGDLFAALPGARAHGAEFAADALERGASAILTDEAGFALVSALGTDAPVLVHEDPR
GVLGELSATIYGRPSEKMQVIGITGTSGKTTTSYLVEGALNAAGRTTGLVGTIETRMSGR
RVPSALTTPEAPQLHALFAVMLEQGIDTVVMEVSSHALSLGRVDGVRFDVGAFTNLSQDH
LDFHRDFEDYFAAKARLFAADSSVHAQHAVVCVDDVWGRRMAEVARGAHSIVTTVATTPE
IDDAVWTAGPATVSPSGSQTFALTTAEGTTLDVDLRLPGQYNVANASLAVALCAALGVDP
RDAVAGIAGVDVPGRVQRIDRGQDFLAVVDYAHKPAAVEAVIATLREQVRGRVAVVVGAG
GDRDAGKRPLMGAAAARGADLLIITDDNPRTEDPAKIRAAIREGALGVPESERGQVWEVA
DRAKAIADAVGWAQAGDVVLVAGKGHEIGQEIHGVKYPFDDRDVLGDAIERQVGGTR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgttccgtcccgcccgcagtcggcgtcagtggaggtgaaggtcacagacggtctt
cgccccgcccagccggtccgtaccacggtgagcgctctggcagcgctcgccggagcgagg
gtcgaggcacccaccggaaccgccgagcacgtgatcgtcaccggtgtggatctccgcgcc
caggggatcgtggagggcgatctgttcgcagcccttcccggggcccgcgcgcacggcgcg
gagttcgcggccgacgctctcgaacgcggagcgagcgcgatcctcaccgacgaggccgga
ttcgcactcgtgtccgcgttgggcaccgacgccccggtgctcgtccacgaagacccgcgc
ggcgtgctcggtgagctgtcggccaccatctacggtcggccctcggagaagatgcaggtc
atcggcatcacggggacgtcgggaaaaaccaccacctcgtatctcgtcgaaggagccctc
aacgcggccggccggacgacgggtctcgtgggcaccatcgagacccggatgagcggccgt
cgcgtgccgagcgccctgacgacccccgaggcgccgcagctccacgccctgttcgccgtg
atgctcgagcaggggatcgacaccgtcgtcatggaggtgtccagccacgcgctgtccctc
ggccgcgtcgacggagtccgcttcgacgtgggcgcgttcacgaatctctcccaggaccac
ctggacttccaccgcgacttcgaggactacttcgctgccaaggcgcggctgttcgcggcc
gactcgtccgtgcacgcgcagcacgccgtcgtctgcgtcgacgacgtgtggggccggcgg
atggccgaggtggcgcgcggcgcccactcgatcgtgacgacggtcgcgaccacgccggag
atcgacgacgcggtgtggacggcgggaccggcgacggtatcgccctcgggctcgcagacg
ttcgcgctcaccaccgccgagggcacgaccctcgacgtggacctccggctgccggggcag
tacaacgtcgcgaatgcgtcgctcgccgtcgcactgtgcgccgcgctgggcgtcgatccg
cgcgacgccgtcgcgggtatcgccggggtcgacgtgccgggccgggtgcagcggatcgac
cgggggcaggacttcctcgccgtcgtcgactacgcgcacaagccggcagcggtcgaggcc
gtgatcgcgacgctgcgcgagcaggtacgcggccgcgtcgccgtcgtcgtgggtgccggc
ggcgatcgcgacgcgggcaagcggcccctgatgggcgccgcggccgcgcggggagcggac
ctgctcatcatcacggacgacaacccgcgtaccgaggatccggcgaaaatcagggccgcg
atccgcgagggcgccctcggggtgcccgaatccgagcggggacaggtgtgggaagtagcg
gaccgagcgaaggcgatcgccgacgccgtcggctgggcgcaggcaggcgacgtggttctg
gtcgcaggcaagggacacgagatcggtcaggagatacacggggtgaagtacccatttgac
gaccgcgacgttctgggcgacgcgatcgagcgacaggtcggaggaacgcgatga
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