Rhodococcus pseudokoreensis: JWS13_40820
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Entry
JWS13_40820 CDS
T08508
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JWS13_40820
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpsk01007
]
JWS13_40820
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpsk03016
]
JWS13_40820
Enzymes [BR:
rpsk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
JWS13_40820
Amino acid related enzymes [BR:
rpsk01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JWS13_40820
Transfer RNA biogenesis [BR:
rpsk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JWS13_40820
Prokaryotic type
Other AARSs
JWS13_40820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QSE94505
LinkDB
All DBs
Position
7787553..7790687
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AA seq
1044 aa
AA seq
DB search
MTDTSNVTSSNESYPKVDYGVSQDAGVRFPQIEQRVLAGWDEDDTFRASVTQRDDAPEFV
FYDGPPFANGLPHYGHLLTGYVKDLVPRFQTMRGKKVERRFGWDCHGLPAELEAEKQLGI
KDKAEIDVMGLEKFNEYCKSSVLRYTDEWRDYVTRQARWVDFDNDYKTLDLDFMESVMWA
FKELFDKGLIYQGFRVLPYSWYEQTPLSNQETRLDDAYKMRQDPAVTVDMPLRGEGPLDG
ANAIIWTTTPWTLPSNLAVAVHPDIDYVQVAGGDGKRYVLAKDRLGHYARELGEAPEVLS
EHKGSELVGLSYDPPFDFFAGHDNAHRVLSADYVTTESGTGIVHMAPAFGEEDYDYCVRN
GIELVQPLDPGGKFTAMVPPYEGLLVFDANPVIIKDLKAAGKLLRHETIEHSYPHSWRSG
QPLIYMAVPSWFVAVTKFRDRMVELNQDITWVPEHIRDGQFGKWLEGARDWNISRNRYWG
SPIPVWVSDDPAYPRTDVYGSLDELERDFGVRPTDLHRPMIDDLVRPNPDDPTGKSMMRR
VPEVLDCWFESGSMPYAQVHYPFENREWFDSHFPGDFIVEYNGQTRGWFYTLHVLATALF
DRPAFKTVAAHGIVLGEDGLKMSKSKGNYPDVKEVFERDGSDAMRWFLMSSPILRGGNLV
VTEQGIREGVRQALLPLWNAWSFLQLYAPTSGEWRTDSTNVLDRYILAKLAGTRDVITDA
LETNDIAGACDELRTFCDALTNWYVRRSRSRFWDEDAEAVDTLHTVLEVVTRLAAPLLPL
ISEVIWRGLTGGRSVHLADWPAQGELPADAELVSAMDEVRSVCSTVLGLRKAQNLRVRLP
LPEVTVAAEDAERLRPYLGLIADEVNVKKVDLTTDVDVHGRFELVVNARAAGPRLGKDVQ
TVIKAVKAGDWSENSDGVVVAAGIELLPEEYTQRLVAAEPESTAALPDGAGLVVLDSAVT
EELEAEGWAKDRIRELQDARRAAGLEVSDRITVVLDVPAERRDWALAHRELIAGEILAVQ
LELAEAPTDAVELGEGVRAAITKA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccagcaacgtgaccagcagcaacgagtcgtaccccaaggtcgattacggc
gtctcccaggacgccggcgtccggttcccccagatcgagcagcgggtgctggccggctgg
gacgaggacgacacgttccgggcctcggtcacccagcgcgacgacgcccccgagttcgtg
ttctacgacggcccgccgttcgcgaacggtctcccgcactacggccacctcctcacgggg
tacgtcaaggacctggtcccgcggttccagaccatgcgcggcaagaaggtcgagcgccga
ttcggctgggactgtcacgggctgcccgccgaactcgaggcggagaagcaactcggcatc
aaggacaaggccgagatcgacgtcatgggtctcgagaagttcaacgagtactgcaagtcg
tcggtgctgcgctacacggacgagtggcgcgactatgtcacccgtcaggcccggtgggtc
gacttcgacaacgactacaagaccctggacctcgacttcatggagtcggtcatgtgggcg
ttcaaggaactgttcgacaagggcctgatctaccagggcttccgcgtgctgccgtacagc
tggtacgagcagacgccgctgtcgaaccaggagacgcggctcgacgacgcgtacaagatg
cgccaggatccggccgtcacggtcgacatgccactgcgcggtgagggaccgctcgacggc
gccaacgccatcatctggaccaccaccccgtggacgctgccgtccaacctcgccgtcgcg
gtccacccggacatcgactacgtgcaggtcgcgggtggcgacgggaagcgttacgtactc
gcgaaggaccggctggggcactatgcccgcgaactcggcgaggcgcccgaggtgctgtcc
gagcacaagggctccgagctcgtcgggctcagctacgacccgccgttcgacttcttcgcc
ggccacgacaacgcgcaccgggtgctgtccgccgactacgtgaccaccgagtccggcacc
ggaatcgtgcacatggcaccggctttcggtgaagaggactacgactactgcgtccgcaac
ggcatcgaactggtgcagccgctcgacccgggcggcaagttcacggcgatggtgccgccg
tacgagggtctgctggtgttcgacgcgaacccggtgatcatcaaggacctcaaggctgct
ggaaagttgctgcggcacgagacgatcgagcactcgtacccgcacagctggcgcagcggg
cagccgctgatctacatggccgtcccctcgtggttcgtcgccgtcaccaagttccgcgac
cgcatggtggagctgaaccaggacatcacctgggtgcccgagcacatccgcgacggacag
ttcggcaagtggctcgagggtgcccgcgactggaacatcagccgcaaccggtactggggc
agcccgattccggtgtgggtgtccgacgatccggcgtacccgcgcaccgacgtgtacggc
tccctcgacgaactcgagcgtgacttcggggtgcggccgacggatctgcaccgcccgatg
atcgacgacctggtgcgcccgaacccggacgacccgaccggcaagtcgatgatgcgccgc
gtgccggaggtcctcgactgctggttcgagtccgggtcgatgccgtacgcgcaggtgcac
tacccgttcgagaaccgggagtggttcgactcccatttcccgggcgatttcatcgtcgag
tacaacgggcagacccgcggctggttctacacgctgcacgtgctggcgacggcgctgttc
gatcgtcccgcgttcaagaccgttgcggcccacggcatcgtcctgggcgaggacggcctg
aagatgagcaagtccaagggcaactacccggacgtgaaggaggtgttcgagcgcgacggc
tccgacgccatgcgctggttcctcatgtcctcgcccatcctgcgcggcggaaacctcgtc
gtcaccgagcagggcatccgcgagggtgtccggcaggcgctgctgccgctgtggaacgcg
tggagtttcctgcagttgtacgcgccgacgtccggtgagtggcgcacggattcgacgaac
gtcctggaccggtacatcctcgcgaagctggcgggcacccgggacgtcatcaccgacgcg
ctcgagacgaacgacatcgcaggggcgtgcgacgaactgcgcacgttctgcgacgcgttg
acgaactggtatgtgcggcggtcgcgttcgcgcttctgggacgaggacgccgaggccgtc
gacaccctgcacaccgtgctcgaggtggtcacccggctcgccgctccgttgctgcccctg
atcagtgaggtgatctggcgggggctgaccggcggacggtcggtgcacctcgcggactgg
ccggcccagggtgagctgcccgcggatgcggagctggtgtcggccatggacgaggtccgg
tcggtgtgctcgacggtgctgggtctgcgcaaggcgcagaacctgcgggtgcggttgccg
ttgcccgaggtgacggtcgccgccgaggacgcggagcggctgcgcccgtacctcggcctg
atcgccgacgaggtcaacgtcaagaaggtcgacctcaccaccgacgtggacgtgcacggc
cgcttcgagctcgtcgtcaacgcgcgcgccgcggggccgcggctgggcaaggacgtgcag
accgtcatcaaggccgtgaaggccggtgactggtcggagaattcggacggcgtcgtcgtc
gcggcggggatcgagttgctgccggaggagtacacgcagcgtctggtcgccgccgagccg
gagtcgacggcggccctgcccgacggtgccggtctggtggtcctggactcggcggtcacc
gaggaactggaagccgagggctgggcgaaggaccggatccgcgagttgcaggacgcgcgc
cgcgcggccgggctcgaggtgtccgaccggatcaccgtcgtcctcgacgtgcccgcggaa
cggcgggactgggcgctggcgcaccgggaactgatcgcgggtgagatcctcgccgtccag
ctggaactggccgaggcgccgaccgatgccgtggaactcggcgagggtgtgcgggcggcg
atcacgaaggcgtga
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