Rhodopseudomonas palustris TIE-1: Rpal_4053
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Entry
Rpal_4053 CDS
T00722
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00300
Lysine biosynthesis
rpt00550
Peptidoglycan biosynthesis
rpt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rpal_4053
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpal_4053
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpt01011
]
Rpal_4053
Enzymes [BR:
rpt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Rpal_4053
Peptidoglycan biosynthesis and degradation proteins [BR:
rpt01011
]
Precursor biosynthesis
Amino acid ligase
Rpal_4053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACF02549
LinkDB
All DBs
Position
complement(4350352..4351809)
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AA seq
485 aa
AA seq
DB search
MKLRDLFSAEADIAAPAAALAIGGLAVDSRAVKPGDLFFALAGAKTDGARFVAAAVATGA
VAVAGEHRPEGDLAVPFVQLSNARLALAQAAARFYPRQPEVIAAVTGTSGKTSVAAFTRQ
IWQRLGHASASIGTIGLVTPTRSVYGSLTTPDPIALHRSLDEIAREGITHLALEASSHGL
DQFRLDGVRVAAGGFTNLSRDHMDYHPTVAHYLNAKLRLFRNLVQDGGAAVISADHDCSA
QVIEAAGARGLRLITIGRNGDPGAGIKLIDATVEGFAQQLTVEHAGKRHRIKLPLVGEFQ
IENALVAAGLVIGTGGDAAASFAALEHLEGAPGRLDLVGARNGAPVFVDYAHKPDALAKT
LQALRPYAKRKLVVVFGAGGDRDSGKRPLMGAIAAENADVVIITDDNPRSEDPATIRSAI
LAAAPGAREIGDRAEAIRTAIGELQPGDALVIAGKGHETGQIVGDRVLHFSDHDAANAAL
SASAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgcgatctcttcagcgccgaggccgacatcgccgcgccagcggccgctctc
gccatcggcgggctcgccgtcgacagccgcgcggtgaagccgggcgacctgttcttcgcg
ctcgccggggccaagaccgacggggcgcggttcgtcgcggcggcggtcgcgacaggggcg
gtggcggttgcgggcgagcaccggccggagggcgaccttgcggtgccgttcgtgcagctg
tccaatgcgcgcctggcgctggcacaggccgcggcgcggttctatccgcgccagcccgag
gtgatcgcggccgtcaccggcaccagtggcaaaacctcggtcgcggccttcacccggcaa
atctggcagcggctcggccatgcctccgccagcatcggcaccattggtctcgtcaccccg
acgcgcagcgtgtacggctcgctgaccacgccggacccgatcgcgctgcatcgctcgctt
gatgaaatcgcccgcgaaggcatcacccatctggcgcttgaagcctcgtcgcatgggctg
gatcagttccggctcgacggcgttcgcgtcgcggcaggcggcttcaccaatttgtcgcgc
gaccacatggattatcaccccaccgtcgcgcactatctcaatgccaagttgcggctgttc
cgcaatctggtgcaggacggcggcgcggcagtgatctccgccgatcacgactgttcggcc
caagtgatcgaagcggcgggcgcccgcggcctgcggctgatcacgatcggccgcaacggt
gatccgggcgcaggcatcaagctgatcgacgccacggtcgaaggcttcgcgcaacagctc
acggtcgagcacgcggggaagcggcatcgcatcaaactgccgctggtcggcgaattccag
atcgagaacgcgctggtcgcggcaggtctggtgatcggcaccggcggcgacgcggcggcg
agcttcgccgcgctcgaacatctcgaaggtgcgccgggccggctcgatctggttggcgcc
cgcaacggcgcaccggtgttcgtcgactacgcgcacaagcccgatgcgctcgccaaaacc
ctgcaggcgctgcgtccctatgccaagcgcaagctggtcgtggtgttcggcgccggcggt
gatcgcgactccggcaagcggccgctgatgggcgcgatcgcagctgagaacgccgacgtg
gtgattatcaccgacgacaatccgcgcagtgaagatcccgccacgatccgctccgccatt
cttgcggctgcgcccggcgcgcgcgagatcggcgatcgcgccgaggcgatccgcacagcg
atcggcgagctgcagccgggtgatgcgctggtgatcgccggtaagggccacgaaaccggg
cagatcgtgggcgaccgcgtgctgcatttcagcgaccacgacgccgcgaatgcggcgcta
tcagcgagcgccgcatga
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