Ralstonia pseudosolanacearum RS 476: CDC45_07200 Help Entry CDC45_07200       CDS       T05645                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rpu  Ralstonia pseudosolanacearum RS 476 Pathway rpu03030   DNA replication rpu03410   Base excision repair rpu03420   Nucleotide excision repair rpu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rpu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CDC45_07200    03410 Base excision repair     CDC45_07200    03420 Nucleotide excision repair     CDC45_07200    03430 Mismatch repair     CDC45_07200  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rpu03032]     CDC45_07200    03400 DNA repair and recombination proteins [BR:rpu03400]     CDC45_07200 Enzymes [BR:rpu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CDC45_07200 DNA replication proteins [BR:rpu03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CDC45_07200 DNA repair and recombination proteins [BR:rpu03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CDC45_07200    NER (nucleotide excision repair)     GGR (global genome repair) factors      CDC45_07200    MMR (mismatch excision repair)     DNA ligase      CDC45_07200   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CDC45_07200 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH Motif Other DBs NCBI-ProteinID:  AST26999 LinkDB All DBs Position 1493653..1496094 Genome browser AA seq 813 aa AA seqDB search MSKTEHPASGASPETRAAALRATLNRYAHEYYVLDQPSVPDAEYDRLYRELEALEAEHPE LRTPDSPTLRVGGAVLPEFAPVRHVVPMLSIRTETDTTAGGALDFDASVRRELGLAESDP PVEYAAELKFDGLAINLRYEKGFLVQAATRGDGATGEDVTQNIRTIRQIPLGLRPVGGAV PDVLEVRGEVYMRRDDFERLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPLSFFA YGLGEAAGWSGMPDTHSGMLDALVAYGFPVSKERAAVKGGEGLVQFHAAIGAKRDSLPFD IDGVVYKVNSLALQRELGFRTREPRWAVAHKYPAQEALTTVESIGVQVGRTGAITPVARL VPVFVGGVTVTNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVAVVLERRPMEDVPGS DLFNPTQQPKHPPFELPRSCPVCGSHVVREEGEAVARCSGGLFCSAQRKEAIRHFAGRRM MDIEGLGERYIDNLVELEYVHGIADLYRLTLDDFLEMKRRADERDGVTPETVAAGKIATK WAENLLDGIRASKTPPLARFLFAMGIRHVGESTAKTLADWLGSLAIVRRAPAPLLLTLPD VGATVAEAIADFFAEPKNQQALDALLTAGVAPQGEHPPSAKLRDQLEPAELYAALGVPKL TAIRSKQLATLVPSLAQLANVDTAQLEGLPADVAASLLAWLDADDHRTRLGTLDALRAEL LAAMPAGAAEEGALSGKTVVLTGTLPTLSRDEAKAMLEAAGAKVSGSVSKKTDYVVAGVE AGSKLARAQELGVRVLDEAGMLALLQNPPGDSA NT seq 2442 nt NT seq  +upstreamnt  +downstreamnt atgagcaagaccgaacatcccgcgtccggcgcgtcgcccgagacgcgggcagccgcgctg cgcgcgacgctgaaccgctacgcccacgagtactacgtgctggaccagcccagcgtgccg gacgccgaatacgaccggctctaccgcgagctggaagccctggaagccgaacacccagaa ctgcggacgccggattcgcccacgctgcgggtcggcggcgccgtgctgccggagttcgcg ccggtgcggcacgtggtgccgatgctctcgatccgcaccgagaccgacaccaccgccggc ggcgcgctggacttcgatgccagcgtgcgccgcgaactggggctggccgaatccgatccg cccgtcgaatacgcggcggagctcaagttcgatggcctggcgatcaacctgcgctacgag aaaggcttcctggtccaggccgccacgcgcggcgacggggccaccggcgaagacgttacg cagaacatccgcaccatccgccagatccccctcggcctgcggcccgtcggcggcgccgtg cccgacgtgctcgaagtgcgcggcgaggtctacatgcggcgcgacgatttcgagcgcctc aatgcccgccagcgcgagcgcggcgacaagaccttcgtcaacccgcgcaacaccgctgcc ggcgcggtgcgccagctcgacccgaagatggccgccgagcgcccgctgtcgttcttcgcc tatggcctgggcgaggcggccggctggagcgggatgcccgacacgcattccggcatgctc gatgcactggtcgcctacggtttcccggtcagcaaggaacgtgcggcagtgaagggcggg gaagggctggtgcaattccacgccgccatcggcgccaagcgcgacagcctgccgttcgat atcgatggcgtggtctacaaggtcaactcgctggcactgcagcgcgagctgggctttcgc acgcgcgagccgcgctgggcggtggcgcacaagtacccggcgcaggaggcgctgaccacg gtcgagtcgatcggcgtgcaggtcggccgcaccggggccatcacgccggtggcgcgtctg gtgccggtgttcgtcggcggcgtgacggtcaccaacgcgaccctgcacaacgaagacgaa gtccgccgcaaggacgtgcgcgtgggcgacaccgtgatcgtgcgccgcgccggcgacgtg atccccgaggtggtggccgtggtgctggagcgccgcccgatggaagacgtgccgggcagc gatctgttcaaccccacgcagcagcccaagcatccgccgttcgaactgcccaggagttgc ccggtctgcggctcgcacgtggtgcgcgaagagggcgaggcggtggcgcgctgctcgggc ggcctgttctgctcggcgcagcgcaaggaggcgatccgccatttcgccggccgccgcatg atggacatcgaaggcctgggcgagcgctacatcgacaacctcgtcgagctggaatacgtg cacggcatcgccgacctgtaccggctcacgctcgacgatttcctcgaaatgaagcgccgc gccgacgagcgcgacggcgtgaccccggagaccgtggccgccggcaagatcgccaccaag tgggccgagaacctgctggacggcatccgggccagcaagaccccgccgctggcgcgcttc ctgttcgcgatgggcatccgccatgtcggcgaatcgacggccaagacgctggccgactgg ctgggcagcctggcgatagtccgccgcgcgccggcgccgctgctgctgaccttgcccgac gtgggggcgaccgtcgccgaggccatcgccgatttctttgccgagccgaagaaccagcag gcgctcgacgccctgctcaccgccggcgtggcgccccagggcgagcacccgcccagcgcg aagctgcgcgaccaactggagcccgccgaactgtacgccgcgctcggcgtgcccaagctg acggccatccgcagcaagcagctggcgacgctggtgccgtcgctcgcgcaactggccaac gtcgacaccgcgcagctggaaggcctgccggcggacgtggcggcgtcgctgctggcctgg ctggatgccgacgaccatcgcacccggctggggacgctggacgcgctgcgcgccgaactg cttgccgccatgccggccggggccgccgaggaaggcgcgctgagcggcaagaccgtggtg ctgaccggcacgctgcccaccctgagccgcgacgaggccaaggccatgctggaggcggcc ggcgccaaggtgtccggctcggtgtcgaagaagaccgactacgttgtggctggcgttgag gcgggcagcaagctcgcccgcgcgcaggagctgggcgtgcgggttctggacgaagccggt atgctcgcgctgttgcagaacccgccgggagattccgcgtga

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