Agrobacterium pusense CFBP5875: CFBP5875_15370
Help
Entry
CFBP5875_15370 CDS
T06598
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFBP5875_15370 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_15370 (nth)
Enzymes [BR:
rpus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFBP5875_15370 (nth)
DNA repair and recombination proteins [BR:
rpus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFBP5875_15370 (nth)
Prokaryotic type
CFBP5875_15370 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QCL86035
LinkDB
All DBs
Position
linear:250194..250976
Genome browser
AA seq
260 aa
AA seq
DB search
MTIAKKRSSTQTLKKSNPAAARRPARVKTAYSREELSEIFRRFSIQRPEPKGELEHTNPF
TLLVAVALSAQATDVGVNRATRALFKVADTPEKMLALGEEELIGYIKTIGLYRNKAKNVI
ALSQMLIDNFGGEVPKTRDELVTLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCL
APGKTPDEVEDRLIRIIPEEYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEKTF
DIPAPLVELPAQLFGSAGGE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgccaagaaacgatccagcacccaaaccttgaaaaagtcaaatccggcagcc
gcgcgcaggccggcgcgggtgaagacggcctattccagggaggagctcagcgaaatcttc
cgccgcttttccatccagcggccggaaccgaaaggcgagctggaacataccaatcccttt
accctgctggtggctgtggcgctgtccgcacaggcgaccgatgtgggcgtgaaccgggcc
acccgcgcgctgttcaaggtggccgatacgccggaaaagatgctggcgctcggcgaggaa
gaactgatcggttacatcaagaccatcgggctttaccgtaacaaggcgaagaacgtcatt
gccctgtcgcagatgctgatcgacaatttcggcggcgaggtgccgaagacccgcgacgaa
ctggtgacgcttcccggtgtgggccgcaagacggccaatgtggtgatgtcgatggccttc
ggcgtgcccacgcttgcggtggacacacatgtgttccgcatcgccaaccggctctgtctt
gcgccgggcaagacccctgacgaggttgaagaccggctgatccgcatcattcccgaagaa
tatctgttccatgcgcatcactggctgatcctgcacgggcgttactgctgcaaggcacgc
aagccggaatgcgagcgctgcgtgatcgccgatatctgcaaatcgccggaaaaaaccttc
gatattccggcgccgctggtggaattacccgcgcagctgttcggttcggctggcggcgaa
tga
DBGET
integrated database retrieval system
