Rhodopseudomonas palustris DX-1: Rpdx1_3133
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Entry
Rpdx1_3133 CDS
T01381
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx01501
beta-Lactam resistance
rpx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rpdx1_3133
01503 Cationic antimicrobial peptide (CAMP) resistance
Rpdx1_3133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpx03036
]
Rpdx1_3133
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpx02000
]
Rpdx1_3133
01504 Antimicrobial resistance genes [BR:
rpx01504
]
Rpdx1_3133
Chromosome and associated proteins [BR:
rpx03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Rpdx1_3133
Transporters [BR:
rpx02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Rpdx1_3133
Antimicrobial resistance genes [BR:
rpx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Rpdx1_3133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
OEP
Biotin_lipoyl_2
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
ADU44712
UniProt:
E6VMW0
LinkDB
All DBs
Position
complement(3342088..3343305)
Genome browser
AA seq
405 aa
AA seq
DB search
MSSHSTVAAIAALAFAVALAGCKPQSDDHGAESAGVDRPEVGIVTLRPQAVAMTAELPGR
VVASQMAEVRPQVSGIVQQRLFTEGSEVAEGASLYQIDPAPYKAAYDSAVAALRKAEAAV
PSAQAKSERYQGLVKQNAVSKQDLDDAVAALAQAKAEVATAKAAVETARINLDYTTIKAP
IGGRTDRSSLTPGALVTAGQTGLLTTIRTLDPILVDVIQSSTNLLNLRQAIDSGRLKVSG
PHVAVKLKLENGAIYPLAGKMEFSEANVSTSTGTVTLRAVFPNPQRLLLPGMYARAVVEE
GVAPDSFLVPQRAVTRNTKGEAVAMFLDKDGKAEERVLSVIRSVGNNWLIGAGVHDGDRV
IVEGTQYVRPGQMAAGTEVVVDDTTGEVRERLPRQRRAARPRAEP
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcccattcaacggttgccgcgatcgcggctctggcgtttgccgtggcgcttgct
ggctgcaagccccagtcggacgatcacggcgccgagtccgccggcgtcgaccgtcccgag
gtcggcatcgtgacgctgcggccgcaggcggtggcgatgaccgcggagcttcccggtcgg
gtcgtcgcttcgcagatggccgaggtgcgtccccaggtatcgggcatcgttcagcagcgc
ctgttcaccgaggggagcgaggtcgccgaaggcgcgtcgctctaccagatcgatcctgcg
ccctacaaggctgcctatgacagcgccgtcgcggccttgcggaaggcggaagctgcggtg
cccagcgcgcaggccaagtcggagcgctatcagggcctcgtcaaacagaacgccgtcagc
aaacaggatctcgacgatgcggttgccgcgctcgcccaggcgaaagcggaggtggccacc
gcgaaagccgccgtcgagaccgccaggatcaacctcgactacacgacgatcaaggcgccg
atcggcggccggaccgaccgctcgtcgctgacgcccggtgcgctggtcacggccggccag
accggcttgctgaccacgatccgcacgctcgacccgattttggtcgacgtcattcagtcg
agcaccaacctgctgaacctgcggcaagcgatcgactccggacgcctgaaagtgagcggt
ccgcatgtcgcggtgaaactgaagctggaaaacggcgcgatctatccgctggccggcaag
atggagttttccgaggccaatgtcagcacctcgaccggcacggtgacgttacgcgcggtg
tttcccaatccgcagcgactgctgttgcccggcatgtatgcccgcgccgtggtcgaagag
ggcgtggcgccagacagcttcctggtgccgcagcgcgccgtcacccgaaacaccaagggt
gaggcggtcgcgatgttcctcgacaaggacggcaaggccgaggaacgcgttctgtccgtg
atccgcagcgtcggcaacaactggctgatcggcgccggcgttcacgacggcgaccgggtg
atcgtcgaaggcacgcagtatgtgcgtcccgggcagatggccgccggcaccgaagtcgtg
gtcgacgacacgaccggcgaagtgcgcgaacggctgccgcggcaacgacgcgccgcgcgt
ccaagggcagagccatga
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