Rhodococcus pyridinivorans SB3094: Y013_05780
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Entry
Y013_05780 CDS
T02974
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00300
Lysine biosynthesis
rpy00550
Peptidoglycan biosynthesis
rpy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Y013_05780
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Y013_05780
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpy01011
]
Y013_05780
Enzymes [BR:
rpy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Y013_05780
Peptidoglycan biosynthesis and degradation proteins [BR:
rpy01011
]
Precursor biosynthesis
Amino acid ligase
Y013_05780
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Mtf2_C
Motif
Other DBs
NCBI-ProteinID:
AHD20209
UniProt:
V9XDV5
LinkDB
All DBs
Position
complement(1213505..1215130)
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AA seq
541 aa
AA seq
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MTQISVLADAIGARVEIVNAAAGEDAARAAAITGIDLRAQGIRPGDVFAALPGARAHGAS
YAGTALERGAVAVLTDEAGRDLVAEATSDSVAVLVHPEPRVALGAASATVYGHPSRSMQV
IGITGTSGKTTTSYLVEAGLVAAGRVVGLVGTVETRIEGIRVPSTLTTPEAPQLHALFAV
MRERGVDTVVMEVSSHALALGRVDATEFAVGGFTNLSQDHLDFHKDLDDYFGAKARLFAE
DSPVRARRAVVCTDDVWGRRMAEVARAGRDDATAVRTVTTGDAGDAAGAAADWTVTDEVP
EETGVQQFTLTGPDGIARRATVGLPGRYNVTNAALAVALCAEVGADIDAAIRGIADVAVP
GRVERVERGQDFLAVVDYAHKPAALEAVIGTLRAATEGRIAVVVGAGGDRDRTKRPIMGE
VAARAADLVVVTDDNPRTESPAAIRAAVLDGAHSVPAAERGEILEIGDRAAAIDAAVAWA
RPGDVVLVAGKGHETGQEIDGVKHPFDDREVLGAALDKYRTAGPDGDHPPAAGGSHHGGK
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagatctcggttctcgccgacgccatcggggcgcgcgtcgagatcgtcaatgca
gccgccggagaggatgcggcccgcgcggccgcgatcaccggcatcgacctgcgcgcccag
ggcatccgccccggcgacgtcttcgccgcgctgcccggcgcgcgcgcccacggcgcctcc
tacgcgggcaccgcgctcgaacgcggagcggtcgccgtgctgaccgacgaggccggtcgc
gacctcgtcgccgaggccacctccgattcggtcgcggtcctcgtccatcccgaaccgcgt
gtcgcgctgggggcggcgtcggccaccgtctacggacacccctcccggagcatgcaggtc
atcggcatcacgggcacgtccggtaagaccacgacgtcctatctcgtcgaggcaggcctc
gtcgcggccggacgcgtcgtcggtctcgtcgggaccgtggagacccggatcgaaggcatt
cgcgtgccgagcaccctcacgacacccgaggcgccgcagctgcacgccctgttcgccgtc
atgcgcgaacgcggtgtcgacacggtcgtgatggaggtttccagccatgccctcgcactc
ggtcgcgtggacgccaccgagttcgccgtcggcgggttcaccaacctgtcccaggaccat
ctcgacttccacaaggacctcgacgactacttcggcgcgaaggcccggctgttcgccgag
gactcgccggtccgggcccgccgcgcggtggtgtgcaccgacgacgtgtggggacgtcgc
atggccgaggtcgcgcgcgcgggccgcgacgacgcgaccgcagtccgcacggtcaccacg
ggtgacgccggtgacgctgccggcgctgcggccgattggacggtcaccgacgaggtcccc
gaagagacgggagtgcagcagttcaccctgaccggtccggacgggatcgcccgccgcgcc
accgtcggcctgccgggccgctacaacgtcaccaacgccgctctcgccgtagcgctttgc
gccgaggtgggcgccgacatcgacgccgcgatccgcggtatcgccgatgtcgcggtgccc
ggccgggtcgaacgggtcgagcgcggtcaggatttcctcgccgtcgtcgactacgcccac
aagcccgcggcgctcgaagcggtcatcggaaccctgcgcgccgcgaccgagggacgcatc
gccgtcgtcgtcggtgcgggcggcgaccgcgaccggacgaagcggccgatcatgggcgag
gtcgcggcgcgggccgccgatctggtggtcgtgaccgacgacaacccacgaaccgagagc
cccgccgccatccgcgcggccgtcctcgacggtgcacactccgtcccggcggccgaacgc
ggcgagatcctcgagatcggcgatcgcgccgcggcgatcgacgccgcggtcgcgtgggcc
cgcccgggcgacgtcgtcctcgtcgccggcaagggccacgagacggggcaggagatcgac
ggagtgaagcaccccttcgacgaccgcgaggtcctcggcgcagctctcgacaagtaccgg
accgcaggacccgacggtgaccatccgcctgctgcgggcggttcgcatcacggaggcaag
gcatga
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