Rhodococcus pyridinivorans SB3094: Y013_17050
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Entry
Y013_17050 CDS
T02974
Name
(GenBank) phytoene dehydrogenase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00906
Carotenoid biosynthesis
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
Module
rpy_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Y013_17050
Enzymes [BR:
rpy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
Y013_17050
1.3.99.28 phytoene desaturase (neurosporene-forming)
Y013_17050
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
Y013_17050
1.3.99.31 phytoene desaturase (lycopene-forming)
Y013_17050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
Pyr_redox
FAD_oxidored
FAD_binding_3
NAD_binding_9
GIDA
Thi4
Pyr_redox_3
AlaDh_PNT_C
MCRA
Lycopene_cycl
MurD-like_N
NAD_binding_7
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AHD22222
UniProt:
V9XLK6
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All DBs
Position
3652354..3653973
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AA seq
539 aa
AA seq
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MRSVGGSVESVVVVGAGLAGLSAALHLTGAGKRVTVLERENTVGGRVGTYPVFEDGRHLY
DIDNGASVLTMPNLIADALAAVGESFDSTIPALDLTPLAPGYHARFADGTALNVYSDPDE
MTAEIARVCGSEEAGGYRRLRRWLASIFDAEFDRYIDSNFDSPLDLVSTPAALRDTANLI
RLGGFGRLGSRVGSFIRDDRLRRIFTFQALYAGTAPSTALAVYGAIAHMDTSLGVYFPRG
GMSTIAAAMVDALVRNGGTVHTGVEVSELRVDGGRAKSVRSADGREFAADAVVLTVDLPV
VDDLLLRAGVPPRRRARNATVASPSAVVFHGTVPTEVTQAWPDSHHTIDFGEEWAETFAR
ITAPRGRGRLMADPSLLITRPAVTDPSLRVVRGGVECEPVSVLAPCPNLAAAPLDWDRLG
RPYMREIQQVLEQRGYRGLASSMRVDHIDTPQTWADKGMLDGSPFSAAHLFRQTGPFRRP
NLVHGVDNVVLAGSGTTPGVGVPTVLISGRLAAERISGGATAGPTTMSIPMEAGAVAHG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccgtcggcggctccgtcgagtccgtcgtcgtggtgggtgcgggcctcgcggga
ctgtccgcggcgctccacctcaccggtgccggcaagcgcgtcaccgtcctcgaacgcgag
aacacggtcggtggtcgcgtgggtacgtacccggtgttcgaggacgggcggcatctctac
gacatcgacaacggcgccagtgtgctgacgatgccgaacctcatcgccgacgcgctcgcg
gccgtcggggaatccttcgactcgaccatcccggcgctcgacctcaccccgctcgcaccc
ggctaccacgcgcgcttcgccgacggcaccgccctgaacgtgtactccgatccggacgag
atgaccgccgagatcgcgcgcgtgtgcggttccgaggaggccggcggataccggcggctg
cgccgctggctcgcgtcgatcttcgacgccgagttcgaccgctacatcgactccaacttc
gattcgccgctcgacctcgtgtcgacacccgcggcgctgcgcgacaccgccaacctcatc
cggctcggcggcttcggccggctcggatcgcgcgtcgggtcgttcatccgggacgaccgg
ctccggcgaatcttcaccttccaggccctgtacgcgggcaccgcaccgtcgacggccctg
gcggtctacggcgccatcgcccacatggacacctcgctcggcgtctacttcccgaggggc
ggcatgtccaccatcgccgccgcgatggtcgatgcgctcgtccgcaacggcggcaccgtg
cacaccggggtcgaggtgtcggaactccgcgtcgacggcggccgcgcgaagagcgtgcgt
tccgcggacggccgggagttcgccgccgacgccgtcgtcctcaccgtggacctgcccgtg
gtcgacgacctgctgctgcgcgccggggtcccgccgcgccgccgcgcccgcaacgccacc
gtcgcgtcgccctcggccgtcgtcttccacggcacggtgcccaccgaggtgacgcaggcc
tggccggattcccaccacaccatcgatttcggtgaggagtgggcggagaccttcgcgcgg
atcaccgcaccgcgcggccgcggccggttgatggccgatccgtccctgctcatcacgcga
cctgccgtgaccgatccgtccctgcgggtcgtgcgcggcggtgtcgagtgcgaaccggtc
tcggtgctggctccgtgcccgaatctcgctgccgcacccctcgattgggaccgactcggc
aggccgtacatgcgggagatccagcaggtcctcgagcagcgcggctatcggggactcgcg
agttcgatgcgagtcgaccacatcgacaccccgcagacctgggccgacaagggcatgctc
gacggcagccccttctcggcggcgcacctgttccggcagaccgggcccttccgccgcccg
aacctcgtgcacggcgtcgacaatgtcgtcctcgccgggtcgggtaccacgccgggtgtc
ggcgtcccgaccgtgctcatctccggacgtcttgccgcagaacgtatctccggtggtgcg
actgccgggcctacgacgatgtcgattccgatggaagcaggtgcggttgctcatgggtga
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