Rhodococcus pyridinivorans SB3094: Y013_23100
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Entry
Y013_23100 CDS
T02974
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00020
Citrate cycle (TCA cycle)
rpy00630
Glyoxylate and dicarboxylate metabolism
rpy00785
Lipoic acid metabolism
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
rpy01210
2-Oxocarboxylic acid metabolism
Module
rpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Y013_23100 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
Y013_23100 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Y013_23100 (kgd)
Enzymes [BR:
rpy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Y013_23100 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
Y013_23100 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
Y013_23100 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
Y013_23100 (kgd)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AHD23292
UniProt:
V9XPN6
LinkDB
All DBs
Position
complement(4887162..4890884)
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AA seq
1240 aa
AA seq
DB search
MYQRFQDDPSSVDASWHEFLTDYSPEAAVAGGTNGSDTATTEKPAPRTASAPSSSASAPT
KPAPKTETASAKPAPQAEAAPAKPAPKAETKPATQPKAQAAPAKPAPKPAAAPSGQATEE
KKVLRGAAAAVAKNMNASLSIPTATSVRAVPAKLMFDNRIVINNHLARTRGGKVSFTHIL
GYAIVQAVKAFPNMNNHFAEVDGKPNLVVPAHTNLGLAIDLPGKNGQRSLVVAAIKNCET
MNFAQFYSAYEDIVRRARDGKLTGDDFSGVTISLTNPGGIGTVHSVPRLMQGQGAIIGAG
AMEYPAEFQGASDARLAEIGIGKLLTLTSTYDHRVIQGAESGEFLKKIHELLISDDFYDG
IFHTLHIPYEPVRWRKDVPEGLVDKHTRVLELIAAYRSRGHLMADTDPLQFVRDKFRSHP
DLDVTTHDLTLWDLDREFNVGGFHGRQKMKLRDVLSVLRDAYCRHVGVEYTHILEPEQQQ
WLQERVEAHHVKPTVAQQKYILSRLNAAEAFETFLQTKYVGQKRFSLEGAESVIPMMDAI
IDQAAEHTLDEVAIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPAAAHGSGDVKYHLG
AEGTYIQMFGDNDIKVSLTANPSHLEAVNPVLEGLVRAKQDILDKGEDGFTVLPLLLHGD
AAFAGQGVVAETLNLALLRGYRTGGTVHIVVNNQVGFTTAPEHSRSSEYCTDVAKMIGAP
IFHVNGDDPEACVWVAKLAVDFREKFHKDVVIDMICYRRRGHNEGDDPSMTQPAMYDVID
TKRSVRKSYTEALIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKYPPEPSESVELDQ
TPPKRLDTSVDRPVLERIGDAFAEAPEGFTVHPRVKPVLEKRREMSRNGKIDWAFAELLA
FGSLAEEGALVRLAGQDSRRGTFTQRHSVIIDRKTGDEYNPLASLANQAGNGGRFMVYDS
ALTEFAGLGFEYGYSVGNPDALVLWEAQFGDFVNGAQPIIDEFISSGEAKWGQLSDVVLL
LPHGHEGQGPDHTSGRIERWLQLCAEGSMTVAVPSTPASYFHLLRRHHLDGIRRPLVVFT
PKSMLRNKAAVSNIEDFTQGKFRSLLEEVPYEEGTADRSKATRVLLTSGKIYWELLAKKQ
KEGRDDVAIVRIEQLYPVPRRRIAETLEQYPNATEFFWVQEEPANQGAWPFLGLALPELL
PDKLSGIKRVSRRAMSAPSSGSSKVHAVEQQEIIEKAFGR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagcgcttccaggacgacccttcgtccgtggacgcgagttggcacgaattcctc
accgactattcgccggaagccgcggtggccggaggcaccaacggctccgacaccgccacg
accgagaagcccgcgccgcgcacagcatctgcgccgagttcctccgcttcggcccccacc
aagcctgcaccgaaaaccgagaccgcgtcggcgaagcccgcaccgcaggccgaggccgcg
ccggccaagcctgcaccgaaggcggagaccaagcctgcgacgcagccgaaggcccaggca
gcgcccgcgaagccggctcccaagcccgccgcggccccgtcgggccaggccaccgaggag
aagaaggttctgcgcggcgccgctgctgccgttgcgaagaacatgaacgcctcgctgtcg
atcccgacggccaccagtgttcgcgcggtgcccgcgaagttgatgttcgacaaccgcatc
gtcatcaacaaccacctcgcccgcacccggggcggcaaggtctcgttcacccacatcctc
ggttacgcgatcgtccaggcggtcaaggcgttcccgaacatgaacaaccacttcgccgag
gtcgacggcaagccgaacctcgtcgtgcccgcgcacacgaacctcggtctcgcgatcgac
ctgcccggcaagaacggccagcgttcgctggtcgtggcggccatcaagaactgcgagacg
atgaacttcgcgcagttctactcggcctacgaggacatcgtgcgccgcgcccgcgacggc
aagctcaccggcgacgacttctccggcgtcacgatctcgctgaccaacccgggcggtatc
ggcaccgtgcactctgtcccgcgtctgatgcagggccagggcgcgatcatcggcgccggc
gccatggagtacccggccgagttccagggtgcgtccgacgcgcggctcgccgagatcggc
ataggcaagctgctgacgctcacctccacctacgaccaccgcgtgatccagggcgcggag
tcgggtgagttcctgaagaagatccacgagctgctcatcagcgacgacttctacgacggc
atcttccacaccctgcacatcccctacgagccggtccgctggcgcaaggacgtgccggaa
ggtctcgtcgacaagcacacccgtgtgctcgagctcatcgccgcctaccgcagccgcggc
cacctcatggccgacaccgatccgctgcagttcgtgcgcgacaagttccggtcgcatccc
gacctcgacgtcacgacccacgacctgacgctgtgggatctcgatcgcgagttcaatgtc
ggtggcttccacggccgccagaagatgaagctgcgcgacgtgctgtcggtgctacgcgac
gcgtactgccgccacgtcggtgtcgagtacacccacatcctcgagcccgagcagcagcag
tggctgcaggagcgggtcgaggcgcaccacgtcaagccgacggtcgcccagcagaagtac
atcctgagccgcctcaacgccgccgaggcgttcgagacgttcctgcagaccaagtacgtc
ggtcagaagcgcttctcgctcgagggcgccgagtccgtcatcccgatgatggacgcgatc
atcgaccaggccgccgagcacacgctcgacgaggtcgccatcgcgatgccgcaccgcggt
cgcctgaacgtgctcgcgaacatcgtcggcaagccgtactcgcagatcttctcggagttc
gagggcaacctgaacccggccgctgcgcacggttccggcgacgtgaagtaccacctcggc
gccgagggcacctacatccagatgttcggcgacaacgacatcaaggtctcgctcaccgcg
aacccctcgcacctcgaggcggtcaacccggtgctcgagggcctcgtccgcgccaagcag
gacatcctcgacaagggcgaggacggcttcaccgtcctgcccttgctcctgcacggcgac
gctgcgttcgccggtcagggcgtcgtcgcggagaccctcaacctcgcgctgctgcgcggc
taccgcaccggcggcaccgtgcacatcgtcgtcaacaaccaggtcggcttcaccaccgcg
ccggagcactcgcgttcgtccgagtactgcaccgacgtggcgaagatgatcggcgcgccg
atcttccacgtcaacggcgacgaccccgaggcctgcgtgtgggtcgcgaagctcgccgtg
gacttccgcgagaagttccacaaggacgtcgtcatcgacatgatctgctaccgccgccgc
ggtcacaacgagggcgacgacccgtcgatgacccagccggcgatgtacgacgtgatcgac
accaagcgcagcgtccgcaagagctacaccgaggccctgatcggccgcggcgacatctcg
ctcaaggaagcggaagacgccctgcgcgactaccagggacagctcgaacgggtcttcaac
gaggtccgcgaactcgagaagtacccgccggagccgtcggagtcggtcgagctcgaccag
accccgccgaagcgtctcgacacctccgtcgaccggccggtgctcgagcgaatcggcgac
gccttcgccgaggcgcccgagggcttcaccgtccacccgcgcgtcaagccggtgctcgag
aagcgtcgtgagatgtcacgcaacggcaagatcgactgggcgttcgccgagctgctcgcg
ttcggttcgctggccgaggaaggtgccctggtgcgcctggccggtcaggactcgcgtcgc
ggcacgttcacgcagcgccactcggtcatcatcgaccgcaagacgggcgacgagtacaac
ccgctcgcctcgctggccaaccaggccggcaacggcggccgcttcatggtctacgactcg
gcgctgaccgagttcgcgggtctgggcttcgagtacggctactcggtgggcaaccccgac
gcgctcgtgctgtgggaggcgcagttcggcgacttcgtcaacggcgcgcagcccatcatc
gacgagttcatctcgtccggtgaggccaagtggggtcagctttccgacgtcgtgctgctg
ctgccgcacggccacgagggccagggtcccgaccacacctcgggccgcatcgagcgctgg
ctgcagctgtgcgccgagggttcgatgacggtcgcggttccgtcgaccccggcgagctac
ttccacctgctgcgccgccatcacctcgacggcatccgccgcccgctggtggtgttcacg
cccaagtcgatgctgcgcaacaaggccgcggtcagcaacatcgaggacttcacgcagggc
aagttccgctcgctgctcgaagaggttccttacgaggagggcacggccgaccggtcgaag
gccactcgtgtgctgctcacctccggcaagatctactgggaactgctggcgaagaagcag
aaggaaggtcgtgacgacgtcgcgatcgtgcgcatcgagcagctgtacccggtgccgcgt
cgccgcatcgccgagacgctcgagcagtacccgaacgccaccgagttcttctgggtccag
gaggagccggcgaaccagggtgcctggccgttcctcggcctcgcgctgccggaactgctg
cccgacaagctcagcggtatcaagcgcgtgtcgcgtcgcgcgatgtcggcaccgtcgtcc
ggctcgagcaaggtccacgctgtcgagcagcaggagatcatcgagaaggccttcggtcgc
tag
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integrated database retrieval system
