Rubrobacter radiotolerans: RradSPS_1015
Help
Entry
RradSPS_1015 CDS
T03080
Name
(GenBank) Major Facilitator Superfamily
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrd02000
]
RradSPS_1015
01504 Antimicrobial resistance genes [BR:
rrd01504
]
RradSPS_1015
Transporters [BR:
rrd02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
RradSPS_1015
Antimicrobial resistance genes [BR:
rrd01504
]
Gene variants
Tetracycline resistance genes
Transporters
RradSPS_1015
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
RradSPS_1015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-ProteinID:
AHY46298
UniProt:
A0A023X1S8
LinkDB
All DBs
Position
complement(1076532..1077971)
Genome browser
AA seq
479 aa
AA seq
DB search
MSAKGASSTTERPASTRLLLIVLSSAVFVSVLNSSMVNVVVPQIGEDFGAAQAQVGWVIT
SFLLSYAISIPLYGRASDLYSVRSLYVFGLAVFAVGSLLSALAPNLGFLVAGRIVQAVGG
AAIPALGTVAVTKALPAGERGAALGLITSSVGIGAAVGPVVGGLVEELASWHYLFLGSMA
LAAVLIPLSLRVIPRGDRVEGASFDVLGGVLLGLAAGLFLFGITQGQVAGFGSFVPLASF
AGSLVSGVGFYGRINHARDPFVSPKLFANRGYVLAMAVGFFAMLGNVASLVMVPLLVTNV
NGLSAGLAGLVLSPGAVALAVLSPMTGRLSDSLGVKLPIIAGVAAMLLSTAFLSSYGAGA
SPVVVSIGMMGIGVGFAFVSPAAVNAAANALSHGDPGEIGAGLGIFQGAFFLGGGVGPAI
VGAFLAARQDAGSGALNPLYPLSAPAFSDAFLAISASLAISLVGAFFLRNRASSGKNVG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcgaagggcgcgtcgtcgactaccgagcgtccggcctcgacgcggcttctcctt
atcgttctctcttcggcggtctttgtctcggtcttgaacagctcgatggtgaacgtggtc
gtgccgcagatcggggaggacttcggggcggcccaggcgcaggtcgggtgggtcatcacg
tcgtttctgctctcgtatgcgatctccatcccgctctacgggcgggcgtcggacctttac
agcgtgcgctcgctctacgtcttcgggctcgcggtctttgccgtcgggagccttctgagc
gcgctcgccccgaacctcggctttctcgtcgccggaaggatcgtccaggcggtgggagga
gcggcgatcccggcgctcgggacggtcgcggtcacgaaggcgctcccggcgggcgagcgg
ggcgcggcgctcggccttataacgtcgagcgtcgggatcggggcggcggtcggtccggtt
gtcgggggcctcgtagaggagcttgcgagctggcactacctatttctcggctcgatggcg
ctcgcggccgtcctgatcccgctctccctgcgcgttatcccgcgcggcgaccgggtcgag
ggcgcgtccttcgacgttctcgggggcgtgctcctcgggcttgcggcggggctctttctt
ttcgggataacgcaggggcaggtcgcgggcttcgggagcttcgtgccgctcgcaagcttc
gccgggtcgctcgtgagcggggtcggcttctacgggaggatcaaccacgcaagggacccg
ttcgtctctccgaagctctttgcgaaccggggctacgtgcttgccatggcggtcggcttc
ttcgcgatgctcgggaacgtcgcctcgctcgtgatggtcccgctcctcgtcacgaacgtg
aacggtctctcggcggggctcgcggggctcgtgctctcgccgggcgcggtcgcgctcgcg
gtcctctccccgatgacgggcaggctctcggactccctcggggtgaagctgccgataatc
gccggagtcgcagcgatgctcctctcgacggcctttctctcgtcctacggggcgggggct
tctccggtcgtcgtctcgatcgggatgatgggcatcggcgtcggcttcgccttcgtgagc
ccggcggcggtgaacgcggcggcgaacgcgctctcgcacggcgacccgggggagatcggg
gccgggctcggcatctttcagggggctttctttctcggcggcggcgtggggccggcgata
gtcggggcctttctcgccgcccgccaggacgcgggctcgggggctctcaacccgctctac
ccgctgtcggccccggcgttctccgatgcgtttcttgcgatctcggcctcgctcgcgatc
tcgctcgtcggggccttcttcctcagaaaccgcgcgtccagcgggaaaaacgtgggataa
DBGET
integrated database retrieval system
