Rhizobium rhododendri: PR018_09085
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Entry
PR018_09085 CDS
T08971
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00300
Lysine biosynthesis
rrho00550
Peptidoglycan biosynthesis
rrho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PR018_09085
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PR018_09085
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrho01011
]
PR018_09085
Enzymes [BR:
rrho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PR018_09085
Peptidoglycan biosynthesis and degradation proteins [BR:
rrho01011
]
Precursor biosynthesis
Amino acid ligase
PR018_09085
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
DUF4910
Motif
Other DBs
NCBI-ProteinID:
WFS24624
UniProt:
A0ABY8IM87
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All DBs
Position
complement(1850776..1852239)
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AA seq
487 aa
AA seq
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MKLRDLVGTDFPELNGPVGGSLGDIDITGLSADSRQITPGMAFVAVAGTKADGAAFVADA
AARGAAVIFARHAADAGSVPVVAVSEPRRLLALAAARFYGRQPETMVAVTGTAGKTSVAS
FTRQIWAHAGSTAAMIGTTGVISPSRNDYGSLTTPDPVSLHKLLAELADEGVTHAAMEAS
SHGLDQFRLDGVRLKAAGFTNLGRDHMDYHPTVEAYMAAKMRLFDTLLPQGSPAVIFADD
AWSDQAVAAARQAGHDIRTVGRKGNFLTLKRVEHSRHKQVAEVHFGTEIFEVHIPLAGDF
QIANALVAAGLAISTGAPAAVAMQALEKLQGASGRLELIGQTRDGALAYVDYAHKPDALE
NVLAAVRPFTTGRVIVVFGCGGDRDRGKRPIMGEIACRLADVVIVTDDNPRSEQPAAIRA
EIMAAATSATEIADRAEAIRAAVDMLKAGDTLIVAGKGHEEGQTVAGVTLPFSDHAEVRR
ALGETTS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcgtgatctcgtcgggactgattttcccgagttgaacggaccggtcggcggc
tcgctgggcgacatcgacatcacgggtctttccgccgacagccggcagattacgccggga
atggcctttgtcgcggttgccggcaccaaggccgatggcgccgccttcgtggccgatgcc
gctgcgcgcggcgctgctgtgattttcgcccggcatgcggcggatgccggttcggttccg
gttgtagccgtgtccgagccgcgccgcctgttggcgctggcagccgcgcgcttctacggg
cgccagccggagacgatggtcgccgtcacgggtacggccggcaagacctccgttgcctcc
ttcacccgccagatctgggcgcatgccggaagcaccgccgcaatgatcggcacgactggc
gtcatctcgcccagccgcaacgactatggctcgctgacgacgccggatccggtgtcgctg
cacaaactgctggccgaacttgccgacgagggcgtgacccatgccgcgatggaagcctcc
agccatgggcttgaccagttccgtctcgatggtgtgcgtctcaaggctgctggctttacc
aatctcggccgcgatcacatggactatcacccgaccgtagaggcctatatggccgctaag
atgcggcttttcgatacgctgctgccgcagggatcgccagccgtcatctttgccgacgac
gcctggtcggatcaggccgtagctgctgcccggcaggctggtcacgatatccgcaccgtt
ggccgcaagggcaatttcctgacgttgaagcgggtcgagcattcgcgccacaagcaggtc
gccgaggtgcatttcggcaccgagatcttcgaggttcacattccgctggccggcgatttc
cagatcgccaatgcgctggttgcagccggccttgcgatttcgaccggtgctccagcggcc
gtggcaatgcaggcgctggaaaagctccagggtgcttccggacggcttgagctgatcggc
cagacgcgcgacggcgcgcttgcctatgtcgattacgcccacaagccggatgcactggaa
aacgtgcttgcggctgtgcggccttttaccaccggtcgtgtcatcgtcgtctttggctgc
ggtggcgaccgggatcgtggcaagcggccgatcatgggcgagatcgcctgccggctggcc
gacgtcgtcatcgtcaccgacgacaatccgcgctctgaacaaccggctgccatccgcgcc
gaaatcatggctgcggccacctcagccacggaaatcgcggaccgtgccgaggctatccgc
gccgcagtcgacatgctgaaggccggcgatacgctgatcgtggccggcaaggggcacgag
gaaggccagacggtcgccggtgtcaccttgccgttctcggatcatgcggaagtgcgccgg
gcactaggggagacgacatcttga
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