Rhizobium rhododendri: PR018_12580
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Entry
PR018_12580 CDS
T08971
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PR018_12580 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrho03400
]
PR018_12580 (nth)
Enzymes [BR:
rrho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PR018_12580 (nth)
DNA repair and recombination proteins [BR:
rrho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PR018_12580 (nth)
Prokaryotic type
PR018_12580 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFS22005
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All DBs
Position
2599518..2600285
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AA seq
255 aa
AA seq
DB search
MANPKIKSGLPAPKKALATARRKPSFRSVYPKTEIDEIFRRFSIQRPEPKGELEHVNPFT
LLVAVALSAQATDVGVNKATHALFAIADTPQKMLDLGEDRIRDYIRTIGLYRNKAKNVVA
LSAKLISDFGGEVPQTREELVTLPGVGRKTANVVLSMAFGHSTMAVDTHIFRIGNRIRLA
PGKTPDEVEQRLMKVIPDHYLYHAHHWLILHGRYVCKARRPECEHCIIADLCRSPEKSCD
IPAPLVPLPPQFVGE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcccaagatcaaatccggccttccggccccgaaaaaggcccttgcgacagca
cgccgcaagccctcgttccgcagcgtctatccgaagacggaaatcgacgagatcttccgt
cgcttctcgatccagcggcctgagccaaagggcgaactggagcacgtcaatcccttcacc
ctgctcgttgccgtggcactgtcagcgcaggcgactgatgtcggtgtcaacaaggcgaca
cacgccctgttcgccatcgccgataccccccagaagatgctcgacctcggcgaggatcga
atccgcgactatatccgcacgatcggcctctatcgcaacaaggcgaaaaacgtcgtcgcc
ctgtctgcaaagctgatcagcgatttcggcggcgaggtgccccagacccgcgaagagctg
gtgacactgccgggcgtcggccgcaagaccgcaaatgtcgtgctatccatggccttcggc
cattccaccatggccgtcgacacgcacatctttcgtatcggcaaccgcatccggctcgca
cccggcaagacgccggacgaagtcgagcagcggctgatgaaggttattccagaccactat
ctctaccacgcccaccactggcttatcctgcacggtcgctacgtctgcaaggccaggcgg
ccggaatgcgaacattgcatcattgctgacctctgtcgctcgccggaaaaaagctgcgac
atcccggcgccgcttgtacccctaccgccgcaattcgtcggagaatga
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