Rhizobium rhododendri: PR018_20360
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Entry
PR018_20360 CDS
T08971
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rrho
Rhizobium rhododendri
Pathway
rrho01501
beta-Lactam resistance
rrho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PR018_20360
01503 Cationic antimicrobial peptide (CAMP) resistance
PR018_20360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrho02000
]
PR018_20360
01504 Antimicrobial resistance genes [BR:
rrho01504
]
PR018_20360
Transporters [BR:
rrho02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PR018_20360
Antimicrobial resistance genes [BR:
rrho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PR018_20360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WFS25875
LinkDB
All DBs
Position
unnamed1:560256..563393
Genome browser
AA seq
1045 aa
AA seq
DB search
MLAAFFIDRPVFAWVLSIGIILAGAISLTLLPISQYPNVAPPQITISATYPGASPEDTYE
GVTRLVEEELNGIPGLLYYESTSNAQGGISITVTFAPGTAPETAAVEVQNRVRRVEARLP
SSIVQQGISVDTAGGGILLLVALQSKRGTMDGIALGDYMSRNVANELRRVPGVGKVQLFG
SERAMRVWLDPDKLLGLSLTPADVTNAIQAQNAKVAAGRLGAAPSQTDRRVTGSLLIKGQ
LTSPDEFGQIVLRADTDGSAVRLRDVARIEVGADSYATSVRIDGKAAAGASIELAPGGNA
LTTATAIKARLAQLASSLPEDIEYSVPYDTTPFVYISIEQVLMTLAEAMVLVFLVMFLFL
QNIRYTIIPTIVVPVALLGACGVMYTLGFSINVLTMFGMVLAIGILVDDAIVVVENVERI
MMEEGLHPREATKKAMTQITGAVIGITLVLTAVFVPMAFFPGAVGVIYKQFSLTMVSSIL
FSAFLALTLTPALCATFLKPVQKGEAHTKKGFFGWFNRAFDRGSNKYSGWVAGLLRRSGS
TMLIYLAVAAATAWMFLQLPSSFLPDEDQGTLLAQIQGPADATAERTLGSIKLMENVVTS
EPSVDRVVAISGFSFSGSGENAGLSFITLRDWSERTAEQSAQALSAKFNSGFRAIMDSTA
YAMSPPAISGLGTSNGFAFRLQDRGNQGTEALNAARDQFMAEAAKSQILAGVMVEGLADA
PQTVLTIDREKANTYGVTFADINKTISTSLGSSYVNDFPNAGRMQRVTVQADANKRSTIF
DVMKLTVRNSNGGMVPISAFASYAFTRGTTQIVGYNGFPAVRLSGQAAAGFSSGEAITEV
ERIANTLPPGFGYEWSGQSLQEIQSGSQVPMLLGLSVILVFLCLAALYESWAIPLSVLLV
IPLGVIGAVGAVMLRDMPNDIYFKVGLITIMGLSAKNAILIIEFAKDLRAKGKSTFDAAI
EAAHLRFRPILMTSLAFALGVVPLAIATGAGSGSQAAIGTGVLGGMISATVLAIFFVPVF
FAFVMKFSKDPSKHQSDEAPQIADK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccgcattcttcatcgaccgcccagtttttgcgtgggtgctttccatcggcatc
atactggctggcgcaatttcactgacgttgttgccgatctcacagtatccgaatgtagcg
ccgccgcagatcacgatctccgcaacctatcccggggcctcccccgaagacacctacgag
ggcgtaacacgtttggtggaggaggagctcaacggcattcccggtcttctttattacgaa
tccacgtcgaatgcccagggcggaattagcataaccgtaacatttgcgcctggaacggcg
ccggaaacagccgcggttgaggtccagaaccgggtgcgccgtgtagaggctcgactaccg
tcctccatcgttcaacaagggatcagcgtggacaccgcaggtggtggcattctgcttctg
gtcgccttgcaatcgaagaggggtacaatggacggtatcgcgcttggtgactacatgagc
cgcaacgtcgccaatgaattgcggcgcgttccaggtgttggcaaggtgcaactgtttgga
agtgagcgcgcgatgagggtctggcttgatccggacaagctactcggtctcagtttaaca
ccagccgatgttacaaatgccattcaagctcaaaacgcgaaggttgcggccggccgcctc
ggagcagcgccctcccagacggacaggcgcgtcacgggatccttgctcatcaagggccag
ttgacgtcaccggacgagttcggtcagatcgtattgcgcgctgataccgacggctccgcg
gtacgtttgcgtgacgtggcgcgaattgaagttggcgccgacagctatgccacctcggtg
cggatcgacggaaaagcggctgcaggcgcttcgattgagcttgcacccggcggcaacgcg
ctgaccaccgctaccgccatcaaagcgcggctggcgcagctggcgtcctcgcttcccgaa
gacatcgagtattcggtaccttacgacaccacaccgttcgtctacatctctattgaacag
gtgctgatgacgcttgccgaggcgatggtcctcgtcttcctcgtcatgttcctcttcctc
cagaatatccggtacaccatcatacctacgatcgtcgtaccagtcgcgcttcttggtgca
tgcggcgtgatgtacacgctcgggttctcgatcaatgtgctgacgatgttcggtatggtt
cttgcgatcggcatcctcgttgatgacgcgatcgttgtcgttgagaatgtcgagcggatc
atgatggaggaggggctccacccaagggaagcaacgaagaaggcgatgactcaaattacc
ggggccgtgattgggattaccttggtgttgactgctgtcttcgtgccaatggcctttttt
ccaggcgccgttggcgtaatctacaagcagttctcgctgacgatggtatcgtcgatcctc
ttttcggctttcctggccctgacgcttacaccagcgctttgtgcgacgtttctaaagcct
gtccagaagggcgaagctcataccaagaaaggcttcttcggttggtttaatcgtgctttc
gacagaggctccaacaaatatagcggttgggtcgcgggcctgctcagacggtcgggtagt
accatgctgatttatctcgccgtcgccgctgcgaccgcctggatgttcctgcaactgccg
tcttccttcctgccggacgaagatcagggcacgctgctggcccagatccaggggccggca
gatgctacggctgagcgaacactcggctccatcaagctgatggagaatgttgtgacgtcc
gaaccatccgtggaccgcgtggtcgcaattagcggcttcagcttctccgggtcgggcgag
aatgccggactgtctttcatcaccctgagagactggagcgagaggaccgcggagcagtcg
gcacaggctctatcggccaagttcaattccggatttcgggccattatggactcgacagcc
tatgcaatgtcgccgccagctatttcgggtcttggcacatcgaatggttttgcgttccgc
cttcaagatcgtggcaaccaggggactgaagctttgaatgccgcgcgtgaccaattcatg
gcggaagcagccaagagccagatcctcgctggcgtcatggtcgagggcctcgccgatgcg
ccgcaaaccgtactgactatcgatcgcgagaaggcaaacacctatggcgtcacattcgcc
gatatcaacaagacgatcagcactagtctcggctcgtcctatgtcaatgacttccccaac
gcgggacgcatgcagagggtcaccgtgcaggccgatgcgaacaaacgcagcacgatcttc
gatgtgatgaagttgacggtgagaaattcaaatggaggtatggtgccaatctcagccttt
gcaagctacgcctttacgagaggcacgacgcagatcgtcggatacaacggtttcccggcc
gtccgtctcagtggacaggcggctgcaggcttttcctccggtgaggctatcaccgaggtc
gaacggattgccaataccctgccgccgggcttcggctatgagtggagtggccagtcactg
caggaaatccaatccggctctcaggtcccgatgttgctgggcctgtccgtcattctggta
ttcctttgccttgcggcgctgtacgaaagctgggcaattccgctttcggtactgcttgtc
atcccgctcggcgtcattggcgcggtcggtgcggtaatgctgcgcgacatgccgaacgac
atctacttcaaggtcggcctaatcaccatcatggggctttccgccaagaacgccatcctg
atcatcgagttcgcgaaggatcttcgggccaagggaaagtcgacgttcgacgcggcaata
gaggcggcacatcttcgtttccggccaatcctgatgacctcactcgccttcgctctgggg
gtagtgcccttggccattgccacaggcgcgggctccggcagccaagctgcaattgggacc
ggcgtccttggcggcatgatctccgccactgtcctagcaatctttttcgttccggtcttt
tttgccttcgtcatgaagttcagcaaggatccttctaagcatcaatcggacgaggcgcca
cagattgctgataagtga
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