Roseovarius rhodophyticola: RZS32_008915
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Entry
RZS32_008915 CDS
T10617
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RZS32_008915 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrl03400
]
RZS32_008915 (nth)
Enzymes [BR:
rrl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RZS32_008915 (nth)
DNA repair and recombination proteins [BR:
rrl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RZS32_008915 (nth)
Prokaryotic type
RZS32_008915 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WYK19942
UniProt:
A0ABZ2TJY8
LinkDB
All DBs
Position
complement(1765083..1765727)
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AA seq
214 aa
AA seq
DB search
MAKQLDYHTIREIFTRFRDAEDAPKGELHHVNAYTLVVAVALSAQATDAGVNKATKALFK
KADTPQKMLDLGEEQLIEHIKTIGLYRNKAKNVMKLSRILVEEYGGEVPNSRAALQSLPG
VGRKTANVVLNMWWRHPAQAVDTHIFRVGNRTGIAPGKDVDAVERAIEDHIPADFQLHAH
HWLILHGRYICVARKPKCGACLIRDLCPFEDKTL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaactcgactaccacaccatccgcgaaatcttcacccgctttcgcgacgcc
gaggatgcgcccaaaggcgagctgcaccatgtcaacgcctacacgcttgtcgtggcggtc
gccctttcggcgcaagcaacggatgcaggagtgaacaaagccaccaaggcgctctttaaa
aaagccgacaccccgcaaaaaatgctcgatcttggcgaagagcaattgatcgagcatatc
aagaccattggcctttaccgcaataaggccaaaaacgtgatgaaactctcgcgcattttg
gtcgaggaatatggcggcgaggtgcccaattcccgggccgctctgcaatctttgcccggt
gtcgggcgcaagaccgcaaatgtggtgctcaacatgtggtggcgccatccggctcaggcc
gtcgacacgcatatattccgcgttggcaatcgaaccggcatcgcccccggcaaagatgtc
gatgccgttgaacgcgcaatcgaagaccacatccccgctgatttccaactgcacgcccat
cactggcttatcctgcatggccgctacatctgtgttgcgcgcaagcccaaatgcggtgcg
tgccttattcgcgatctctgcccattcgaggacaaaactctatga
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