Rhinopithecus roxellana (golden snub-nosed monkey): 104673225
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Entry
104673225 CDS
T03989
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04512
ECM-receptor interaction
rro04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104673225 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104673225 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rro00535
]
104673225 (AGRN)
Proteoglycans [BR:
rro00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104673225 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
Kazal_CFAI
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
104673225
NCBI-ProteinID:
XP_030798742
LinkDB
All DBs
Position
12:23075456..23110559
Genome browser
AA seq
2048 aa
AA seq
DB search
MAGPSRPGPLRPLLLLVVAACVLPGAGGTCPERALERREEEANVVLTGTVEEILNVDPVQ
HTYSCKVRVWRYLKGKELVARESLLDGGNKVVISGFGDPLICDNQVSTGDTRIFFVNPAP
PYLWPAHKNELMLNSSLMRITLRNLEEVEFCVEDKPGIHFTPVPPTPPDACRGMLCGFGA
VCEPNAEGPGRASCVCKKGPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGP
CGSRDPCSNVTCSFGSTCARSADGLTASCLCPATCRGAPEGTVCGSDGADYPGECQLLRR
ACARQENVFKKFDGPCDPCQGALPDPSRSCRVNPRTRRPEMLLRPESCPARRAPVCGDDG
VTYENDCVMGRSGAARGLLLQKVRSGQCQSRDQCPEPCRFNAVCLSRRGRPRCSCDRVTC
DGAYRPVCAQDGRTYDSDCWRQQAECQQQRAIPSKHQGPCGQAPSPCLGVQCAFGATCAV
KNGQAVCECRQVCSSLYDPVCGSDGITYGSTCELEATACILGREIRVARKGPCDPCGQCR
FGALCEAETGRCVCPSECVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASTGPCET
CGDAMCAFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYGSACELREAACRQQTQIEEARA
GPCEQAECGSGGSGSGEDGDCEQELCRQRGGVWDEDSEDGPCVCDFSCQSVLGSPVCGSD
GVTYSTECELKKARCESRQELSVVAQGACRGPTFAPLLPVTPSHCAQMPYGCCQDNITAA
RGVGLAGCPSTCQCNPHGSYGGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGQ
SGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRALGPTGCEADASAPATC
AEMRCEFGALCMEESGSAHCVCPMLTCPEANITKVCGSDGVTYGNECQLKTIACRQGLQI
SIQSLGPCQEAVAPSTHPTSASVTVTSPGLLPSQALPTPPGAPLPAPSSTAHSQTTPLPS
SQPRTTASIPRTTVWPVLTVPPTAPSPAPSLVASAFGESGSADGSGDEELSGDQEASGGG
SGGLEPFEGSSMATPGPPIERASCYNSPLGCCSDGKTPSLDAEGSNCPATKVFQGVLELE
GVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFRSVRLRDLGPGKSVR
AIVDVHFDPTTAFRAPDVARALLRQIQVSRRRYLGVRRPLQEHVRFMDFDWFPAFFTGVT
SGAIAAVATARATTASRLPSSAVTPRALHPSHTSQPVAKTTAAPTTRRPPTTAPSRVPGR
RPPAPQQPPKPCDSQPCFHGGTCQDRVSGGGFTCSCPAGRGGAICEKVLGAPVPAFEGHS
FLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGSGPA
VLTSAVPVEPGRWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPED
QAAVTLERTFVGTGLRGCIRLLDVNNQLLELGIGPGAATRGSGVGECGSHPCLPNPCRGG
APCQALEAGRFHCQCPPGRVGPTCADEKSPCQPNPCHGAAPCRVLPEGGAQCECPLGRGG
TLCQTASGQDGSGPFVADFNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNG
QKTDGKGDFVSLALQDRRLEFRYDLGKGAAVIRSKEPVTLGAWTRVSLERNGRKGAMRVG
DGPRVLGESPKSRKVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFNGAIQLVSLGGRQ
LLTPEHVLRQVDVTSFADHPCTQASGHPCLNGGSCVPREAAYVCLCPGGFSGPHCENGLV
EKSAGNVDTLAFDGRTFVEYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERAD
YVALAIVDGHLQLSYNLGSQPVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGS
SPLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGQRPLHLLEDAITKP
ELRPCPAS
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggccggcccgtcccgcccgggcccgctgcggccgctgctgctgctggtggtggccgcg
tgcgtcctgcccggagccggcgggacgtgcccggagcgcgcgctggagcggcgcgaggag
gaggcgaacgtggtgctcacggggacggtggaggagatcctcaacgtggacccggtgcag
cacacgtactcctgcaaggttcgggtctggcggtacttgaagggcaaagagctggtggcc
cgggagagcctgctggacggcggcaacaaggtggtgatcagtggcttcggagaccccctc
atctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaaccctgcaccc
ccatacctgtggccagcccacaagaacgagctgatgctcaactccagcctcatgcggatc
actctacgaaacctggaggaggtggagttctgtgtggaagataaacctgggatccacttt
actccggtgcctccgacgcctcctgatgcgtgccgaggaatgctgtgcggcttcggcgcc
gtgtgcgagcccaacgcggaagggccgggccgggcatcctgcgtctgcaagaagggcccg
tgccccagcgtggtggcgccggtgtgtggctcggacgcctccacctacagcaacgaatgc
gagctgcagcgggcgcagtgcagccagcaacgccgcatccgcctgctcagccgcgggccg
tgcggctcgcgggacccctgctccaacgtgacttgcagcttcggcagcacctgtgcgcgc
tcggccgacggactgacggcctcgtgcctgtgccctgcgacctgccgtggcgcccccgag
gggaccgtgtgcggcagcgacggcgccgactatcccggcgagtgccagctcctgcgccgc
gcctgcgcccgccaggagaatgtcttcaagaagttcgacggcccctgtgacccctgccag
ggcgccctccctgacccgagccgcagctgccgcgtgaacccgcgcacgcggcgccctgag
atgcttctacggcccgagagctgtcctgcccggcgggcgccagtgtgtggggacgacgga
gtcacctacgaaaacgactgcgtcatgggcagatcgggggccgcccggggtctcctcctg
cagaaagtgcgctctggccagtgccagagtcgagaccagtgcccggagccctgccgcttc
aatgccgtctgcctgtcccgccgtggccgtccccgctgctcctgcgaccgtgtcacctgt
gatggggcctacaggcccgtgtgtgcccaggacgggcgcacgtatgacagtgattgctgg
cgccagcaggctgagtgccagcagcagcgtgccattcccagcaagcaccagggcccgtgt
ggccaggccccgtccccgtgcctcggggtgcagtgtgcgttcggggcaacgtgtgctgtg
aagaacgggcaggcagtgtgtgaatgccggcaggtgtgctccagcctctacgatcctgtg
tgcggcagcgacggcatcacgtacggcagcacgtgcgagctggaggccacagcctgcatc
ctcgggcgggagatccgggtggcacgcaaaggaccctgtgacccctgcgggcagtgccgc
tttggagccctgtgtgaggccgagaccgggcgctgcgtgtgcccctctgaatgcgtggct
ttggcccagcccgtgtgtggctccgatgggcacacgtaccccagcgagtgcatgctgcat
gtgcacgcctgcacacaccagatcagcctgcacgtggcctcgactggaccctgcgagacc
tgtggagatgccatgtgtgcttttggggctgtgtgctcggcggggcagtgtgtgtgtccc
cggtgtgagcaccccccgcccggccccgtgtgtggcagtgacggtgtcacctatggcagt
gcctgcgagctacgggaagccgcctgccggcagcagacacagatcgaggaggcccgggca
gggccatgtgagcaggctgagtgcggctccggaggctctggctcgggggaggacggtgac
tgtgagcaggaactgtgccggcagcgtggtggcgtttgggacgaggactcagaggatggg
ccgtgtgtctgtgacttcagctgccagagtgtcctgggcagcccggtgtgcggctcagat
ggggtcacctacagcaccgagtgtgagctgaagaaggccaggtgcgagtcacggcaagag
ctctctgtagtggcccagggagcctgccgaggccccaccttcgctccactgctgcccgtg
accccctcacactgtgcccagatgccctatggctgctgccaggacaatatcactgcagcc
cggggcgtgggcctggctggctgtcctagtacctgccagtgcaacccccatggctcctac
ggtggcacctgtgacccagtcacaggccagtgctcctgccgcccgggtgtggggggcctc
aggtgtgatcgctgtgagcctggcttctggaactttcgaggcatcgtcaccgatggccag
agtggctgtacaccgtgcagctgtgatccccagggcgccgtgcgggatgactgtgagcag
atgactgggctgtgctcgtgtaagcccggggtggctggacccaagtgtgggcagtgtcca
gacggccgtgccctgggccccacgggctgtgaagctgatgcttctgcgcctgcaacctgt
gcggagatgcgctgtgaattcggtgcgttgtgcatggaggagtctggctcagcccactgt
gtctgcccaatgctcacctgtccagaggccaatattaccaaggtctgtgggtcagatgga
gtcacatacggcaatgagtgtcagctgaagaccatcgcctgccgccagggcctgcaaatc
tccatccagagcctgggcccgtgccaggaggctgttgctcccagcactcacccgacatct
gcctccgtgactgtgaccagcccagggctccttcccagccaggcactgccgactccccct
ggcgcccccctgccggctcccagcagtaccgcacacagccagaccacccctctgccttca
tcacaacctcggaccaccgccagcatccccaggaccactgtgtggcccgtgctgaccgta
ccccccacggcaccctcccctgcacccagcctggtggcgtctgcctttggtgaatctggc
agcgctgatggaagtggtgatgaggaactgagcggggaccaggaggccagtgggggtggt
tctggggggctcgagcccttcgagggcagcagcatggcaacccctgggccacccatcgag
agggcttcctgctacaactcccctttgggctgctgctctgatgggaagacgccctcgctg
gacgcagagggctccaactgccctgccaccaaggtgttccagggcgtcctggagctggag
ggcgtcgagggccaggagctgttctacacgcctgagatggctgaccccaagtcagagctg
ttcggggagacagccaggagtattgagagcaccctggacgacctcttccggaattcagac
gtcaagaaggattttcggagtgtccgcttgcgggacctggggcccggcaaatccgtccgc
gccattgtggatgtgcactttgaccccaccacagccttcagggcacccgacgtggcccgg
gccctgctccggcagatccaggtgtccaggcgccggtacttgggggtgaggcggccactg
caggagcatgtgcgatttatggactttgactggtttcctgcgtttttcacgggagtcacg
tcaggagccattgctgctgtagccacggccagagccaccactgcgtcccgcctgccgtcc
tctgctgtgacccctcgggccctgcaccccagtcacacaagccagcctgttgccaagacc
acagcagcccccaccacacgtcggccccccaccactgcccccagccgtgttcctggacgt
cggcccccagccccccagcaacctccaaagccctgtgactctcagccctgcttccacggg
gggacctgccaggaccgggtctctggtgggggctttacctgcagctgcccggcaggcagg
ggaggcgccatctgtgagaaggtgcttggtgcccctgtgccggccttcgagggccactcc
ttcctggccttccccaccctccgtgcctaccacactctgcgcctggcgctagaattccgg
gcactggagcctcaggggctgctgctgtacaatggcaacgcccggggcaaggacttcctg
gcgttggcactgctggatggccgcgtgcagctcaggtttgacacaggttcggggcccgca
gtgctgaccagtgcggtgccggtagagccgggccggtggcaccgcctggagctgtcgcgg
cattggcgccggggcaccctctcggtggatggtgagacccccgttctgggcgaaagcccc
agtggcaccgacggcctcaacctggacacagacctctttgtgggcggtgtaccggaggac
caggctgccgtgacgctggagcggaccttcgtgggcacgggcctgaggggctgcatccgt
ttgctggacgtcaacaaccagctcctggagcttggcattgggccgggggctgccacccga
ggctccggcgtgggcgagtgcgggagccacccctgcctgcccaacccctgccgtggcggg
gccccgtgccaggccctggaggctgggaggttccactgccagtgcccgcccggccgcgtc
ggaccaacctgcgccgatgagaagagcccctgccagcccaacccctgccatggggcggcg
ccctgtcgtgtgctgcccgagggtggtgcccagtgcgagtgccccctggggcgcgggggc
accctctgtcagacagcctcggggcaggacggctctgggcccttcgtggctgacttcaac
ggcttctcccacctggagttgagaggcctgcacacgtttgcacgggacctgggggagaag
atggcgctggaggtcgtgttcctggcacgaggccccagtggccttctgctctacaacggg
cagaagacggacggcaagggagacttcgtgtcactggcactgcaggaccgccgcctggag
ttccgctacgacctgggcaagggggcggcggtcatcaggagcaaggagccagtcaccctg
ggagcctggaccagggtctcactggagcgaaacggccgcaagggtgccatgcgtgtgggc
gacggcccccgcgtgttgggggagtccccgaagtcccgcaaggttccgcacactgtcctc
aacctgaaggagccactgtatgtagggggagctcccgacttcagcaagctggcccgtgct
gctgccgtctcctctggcttcaacggtgccatccagctggtctccctgggaggccgccag
ctgctgaccccagagcacgtactgcggcaggtggatgtcacatcctttgcagatcacccc
tgcacccaggcctcaggccacccctgcctcaatgggggctcctgtgtccccagggaggct
gcctatgtgtgcctgtgtcccgggggattctcagggccacactgcgagaacgggctggtg
gagaagtcggcagggaacgtggataccctggcctttgatgggcggaccttcgtcgagtac
ctcaacgctgtgaccgagagcgagaaggcactgcagagcaaccattttgaactgagcttg
cgcactgaggccacgcaggggctggtgctctggagcggcaaggccacggagcgggcggac
tacgtggcactggccattgtggacggccacctgcagctgagctacaacctgggctcccag
cccgtggtgctgcgttccactgtgcccgtcaacaccaaccgctggttgcgggtcgtggca
catagggagcagagggaaggttccctgcaggtaggcaatgaggcccctgtgaccggctcc
tccccgctgggcgccacgcagctggacactgatggagccctgtggcttgggggcctgccg
gagctgcccgtgggcccagcactgcccaaggcctacggcacgggcttcgtgggctgcctg
cgggacgtggtggtgggccagcgcccgctgcacctactggaggacgccatcaccaaacca
gagctgcggccctgccccgcctcatga
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