Rhinopithecus roxellana (golden snub-nosed monkey): 104682554
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Entry
104682554 CDS
T03989
Symbol
APOBEC3D
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03250
Viral life cycle - HIV-1
rro05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104682554 (APOBEC3D)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
104682554 (APOBEC3D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104682554 (APOBEC3D)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104682554 (APOBEC3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC_C
APOBEC3
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
104682554
NCBI-ProteinID:
XP_010387571
UniProt:
A0A2K6NVA4
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All DBs
Position
13:complement(2096190..2107693)
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AA seq
374 aa
AA seq
DB search
MNPQIRKRMERMYRRTFYYNFENEPILYGRRYTWLCYKVKIRNYSSKLRWYTGVFQGQVC
FQPEDHAEMCFLSWFCGKQLPAYKRVQITWFVSWNPCLDCVAKVTEFLAEHPNVTLTISA
ARLYYYWGRDWRRALRRLYEAGARVKIMDDEEFAYCWENFVHNEGQPFMPWDKFDDNYAF
LHYMLKEILRNPMEAMYPHIFYFHFENLEKAYGRNETWLCFTVEIIKQYLPVPWKKGVFR
NQVDPETHCHAEKCFLSWFCNNTLSPKKNYQVTWYTSWSPCPECAGEVAEFLVEHSNVKL
TIYTARLYYFWDTDYQEGLRSLSEEGASVEIMDYEDFQYCWENFVYDDGEPFKRWKGLKT
NFQSLTRRLREILQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacagatcagaaagcggatggagcggatgtatcgacgcacattctactacaac
tttgaaaatgaacccatcctctatggtcggaggtacacctggctgtgctacaaagtgaaa
ataaggaactactcctcaaagctccgttggtacacaggggtctttcaaggccaggtgtgt
ttccagcctgaggaccacgcagaaatgtgcttcctctcttggttctgtggcaagcagctg
cctgcttacaagcgcgtccagatcacctggtttgtatcctggaacccctgcctggactgt
gtggcaaaggtgaccgaattcctggctgagcaccccaatgtcaccctgaccatctccgcc
gcccgcctctactactactggggtagagattggcggagggcgctccgcaggctgtatgag
gcaggggctcgcgtgaagatcatggacgatgaagaatttgcatactgctgggaaaacttt
gtgcacaatgaaggtcagccattcatgccttgggacaaattcgatgacaattatgcattc
ctgcactacatgctaaaggagattctcagaaacccaatggaggcaatgtatccacacata
ttctacttccactttgaaaacctagagaaagcctatggtcggaatgaaacctggctgtgc
ttcaccgtggaaattataaagcagtacttacctgtcccctggaagaagggggtcttccga
aaccaggttgatcctgagacccattgtcatgcagaaaagtgcttcctctcttggttctgc
aacaacacactgtctcctaagaaaaactaccaggtcacctggtacacatcttggagccct
tgtccagagtgtgcaggggaagtggcggagttcctggtcgagcacagcaacgtgaagctc
accatctataccgcccgcctctactacttctgggatacagattaccaggaggggctccgc
agcctgagtgaggaaggggcctccgtggagatcatggactacgaagattttcaatattgt
tgggaaaactttgtgtacgatgatggtgagccattcaagcgttggaagggactaaaaacc
aactttcaatctctgacaagacgcctacgggagattcttcagtga
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