Roseiflexus sp. RS-1: RoseRS_4173
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Entry
RoseRS_4173 CDS
T00542
Name
(GenBank) L-erythro-3-methylmalyl-CoA lyase / L-malyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00630
Glyoxylate and dicarboxylate metabolism
rrs00660
C5-Branched dibasic acid metabolism
rrs00680
Methane metabolism
rrs00720
Other carbon fixation pathways
rrs01100
Metabolic pathways
rrs01120
Microbial metabolism in diverse environments
rrs01200
Carbon metabolism
Module
rrs_M00376
3-Hydroxypropionate bi-cycle
rrs_M00613
Anoxygenic photosynthesis in green nonsulfur bacteria
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RoseRS_4173
00660 C5-Branched dibasic acid metabolism
RoseRS_4173
09102 Energy metabolism
00720 Other carbon fixation pathways
RoseRS_4173
00680 Methane metabolism
RoseRS_4173
Enzymes [BR:
rrs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
RoseRS_4173
4.1.3.25 (S)-citramalyl-CoA lyase
RoseRS_4173
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
DUF6986
Motif
Other DBs
NCBI-ProteinID:
ABQ92517
UniProt:
A5V0W4
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Position
complement(5224965..5226008)
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AA seq
347 aa
AA seq
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MKLPIHFYKPLAVGAPQPIRELPVRPERVIHFFPPHVEKIRARIPDVAKQVDVLCGNLED
AIPMDAKEAARAGFIEVARATDFGDTALWVRVNALNSPWVLDDIAEIVAAVGNKLDVMMI
PKVEGPWDIHFVDQYLALLEAKHQIQKPILIHALLETAQGMMNLEAIAGASPRMHGFSLG
PADLAASRGMKTTRVGGGHPFYGVLADPQEGQEHRPFYQQDLWHYTIARMVDVAVAHGLR
AFYGPFGDLKDEAACEAQFRNAFLLGCTGAWSLAPNQIPIAKRVFSPDVNEVLFAKRILD
AMPDGSGVAMIDGKMQDDATWKQAKVIVDLARMIAKKDPDLAQAYGF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccccattcacttttacaagccgctagcggttggcgcaccgcaaccgatccgc
gaactgccggtgcgtcctgagcgggtgatccatttctttccgccgcatgtcgaaaaaatt
cgtgcccgcattcccgatgtggcaaagcaggtcgatgttctgtgcggcaacctggaagat
gccattccaatggatgccaaagaagcggcgcgcgccggtttcatcgaggtcgcccgcgcg
accgattttggcgacaccgcgctgtgggtgcgggtcaacgccctcaacagcccctgggtg
ctcgacgacattgccgaaattgtcgcggctgtcggcaacaaactcgatgtcatgatgatc
ccgaaggtggaaggaccatgggacatccacttcgtcgatcagtatctggcgctgctggag
gcgaaacaccagattcagaagccgatcctgatccacgccctgctggagactgcccagggt
atgatgaatctggaggcgattgccggcgccagcccgcgcatgcacgggttcagcctggga
ccggcggacctggcggcgtcgcgcgggatgaagaccacccgcgtcggcggcgggcatccg
ttctacggcgtgcttgccgacccgcaggaaggtcaggagcatcgcccgttctaccagcaa
gacctgtggcattacacgattgcgcgcatggtggatgtcgccgtggcgcacgggttgcgc
gccttctacggtccgttcggcgatctgaaggatgaagcggcgtgtgaagcgcagttccgc
aatgcgttcctgctgggatgcaccggcgcgtggtcgctggcgccgaaccagattccgatt
gccaagcgcgtcttcagccccgatgtcaacgaggtattgttcgccaaacgcatcctcgac
gccatgcccgacggctccggcgtcgctatgatcgacgggaagatgcaggacgacgcgacc
tggaagcaggcgaaagtgattgtcgatctggcgcgcatgattgcgaagaaggaccccgac
ctggcgcaggcgtatggcttctga
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