Roseiflexus sp. RS-1: RoseRS_4515 Help Entry RoseRS_4515       CDS       T00542                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rrs  Roseiflexus sp. RS-1 Pathway rrs03030   DNA replication rrs03410   Base excision repair rrs03420   Nucleotide excision repair rrs03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rrs00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     RoseRS_4515    03410 Base excision repair     RoseRS_4515    03420 Nucleotide excision repair     RoseRS_4515    03430 Mismatch repair     RoseRS_4515  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rrs03032]     RoseRS_4515    03400 DNA repair and recombination proteins [BR:rrs03400]     RoseRS_4515 Enzymes [BR:rrs01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      RoseRS_4515 DNA replication proteins [BR:rrs03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      RoseRS_4515 DNA repair and recombination proteins [BR:rrs03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      RoseRS_4515    NER (nucleotide excision repair)     GGR (global genome repair) factors      RoseRS_4515    MMR (mismatch excision repair)     DNA ligase      RoseRS_4515   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       RoseRS_4515 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 Zn_ribbon_NUD UPF0758_N Auto_anti-p27 HVO_2753_ZBP Motif Other DBs NCBI-ProteinID:  ABQ92846 UniProt:  A5V1U3 LinkDB All DBs Position 5660060..5662240 Genome browser AA seq 726 aa AA seqDB search MNNDHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSP TQRVGAPPGEQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDG LAVTLIYRNGILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAV IPPLIEVRGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFF AYGIGQIEGVQVQTQWETLNLLRTLGFPVNRDARRFERLDDALAYCREWMTRRDELEYEV DGVVIKIDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVIE PVNIGGVTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQM PATCPACGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFVE RGWVQDVADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGIRYVGEVV AQILADHFGSLDALAAASADEIDALEGIGPAIAASVAAYFARPESKALIAKLKRAGVRTE AQETARASRGNALAGKTFVITGTLPSMSREEASALITAHGGKVSGSVSKKTDYLVIGAEP GGTKFAKAQELGIPMIDEAGLLALIGSGRTADDQATPASDRRAATASVPPSDDAPGSPRQ LDFDLT NT seq 2181 nt NT seq  +upstreamnt  +downstreamnt atgaacaacgaccacctcacacgccgcgttgaagcgctgcgtgaacagatccgctaccac aactaccgctattacgtcctcgacgaaccggtcatcagcgacgccgagtacgatgcgctg atgcgcgaactgcgcgcgctcgaagcggcacaccccgaacttgtcacccccgactcgccg acgcagcgggttggcgcgccgccgggtgagcagttcgctaaagtgcagcacgtcgtgccg atgctgtcgctcgccaatgcgtccgacgaggctgaggtgcgcgcctggtacgaccgggtg gtgcgtttgcttggcaacgatgcgcgggttgcattcgtcgtcgagccgaagatcgatggg ctggcggtgaccctgatctatcgcaacggcatcctggtgcgcggcgcgacccgcggcgac ggtgagaccggcgaggatgtgaccgctaacctgcgcactattcccggcattccattgcgc ctgggcgcatttgccagcaaccccgaagggcaaacgaatggcgcaccggttcaggcggtc attccgccgttgatcgaagtgcgcggcgaagtgtatatgcgcatcgccgactttctacgc ctgaatgaacaactggcggcatccggcgagaaagtcgccgccaatccgcgcaatgcggct gccggttcgttgcgccagaaagacccggcgatcactgcgcggcgtccgttgcgcttcttt gcctacggcatcgggcagatcgagggagtgcaggtgcagacgcagtgggaaacgctcaac ctcctccgcacgctcggttttccggtcaaccgcgatgcgcgccgcttcgagcgcctggat gatgcgctggcgtactgccgcgagtggatgacgcgccgcgacgaactggagtacgaggtt gacggcgtggtgatcaagatcgacagtcttgcgcaacaggcgcagttgggcgtcgtcggg cgcgatccgcgctgggcgattgcgttcaagttcccggcgcgggaagcggtctcacgcctg atcgatattgtggtgaatgtcgggcgcaccggcgtgattacccccaatgcggtgatcgag ccggtcaacatcggcggtgtgacagtgcggaatgccagtctgcacaatgccgattacatc gccgaacgcgacattcggatcggcgattatgtcatcgtcaagcgcgctggcgacgtgatc ccgtacattgtcggaccgatcgtggcgcggcgtgatggcagcgaacgtccgtggcagatg ccagcgacatgcccggcgtgcggcacgccgctcgaacgcgccgagggcgaggtggcgtat cgctgcccgaactttggcatctgcccggcgcagattacccgccggatcgaacatttcgta tcacgcggcgcgatggatatcgcggggatcggcgagaaacaggtgcaactcttcgtcgaa cgcggctgggtgcaggatgtcgccgacctgtacacgttgacgccggatcattttgcaaac gttgaagggtatggtcccaaacgggtcgccaatctgctcagcgccatcgccgggtcgaag aatcgcccgctccaccgcctgatcgtcgggcttggcattcgctatgtcggcgaagtcgtc gcccagatcctcgccgaccattttggttcgctcgatgcgctggcagccgcttctgccgat gaaatcgatgccctggagggcatcggaccggctatcgccgcaagtgttgcggcatacttc gccagacccgaaagcaaagcgctgatcgctaagttgaagcgggccggtgtgcgcaccgaa gcgcaggaaacggcgcgcgcgtcgcgcgggaatgcgctggcgggcaaaacgttcgtgatc accggcacgttgccatcgatgtcacgcgaagaagccagcgccctgattactgcccatggc ggcaaggtcagcggcagcgtctccaaaaaaaccgattatctggtcatcggcgcagaaccg ggcggaacaaagttcgcaaaagcgcaggaacttggcattcccatgatcgacgaagccgga ctgctggcgctgatcggatcgggcagaaccgcagacgaccaggcgacgcctgcatcggac aggcgcgctgcgacagcgagcgttccgccatcagacgatgcgccagggtcgccccggcag ttagattttgatcttacataa

DBGET integrated database retrieval system