Rhodospirillum rubrum ATCC 11170: Rru_A0939 Help Entry Rru_A0939         CDS       T00310                                  Name (GenBank) DNA ligase (NAD+)   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rru  Rhodospirillum rubrum ATCC 11170 Pathway rru03030   DNA replication rru03410   Base excision repair rru03420   Nucleotide excision repair rru03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rru00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Rru_A0939    03410 Base excision repair     Rru_A0939    03420 Nucleotide excision repair     Rru_A0939    03430 Mismatch repair     Rru_A0939  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rru03032]     Rru_A0939    03400 DNA repair and recombination proteins [BR:rru03400]     Rru_A0939 Enzymes [BR:rru01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Rru_A0939 DNA replication proteins [BR:rru03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Rru_A0939 DNA repair and recombination proteins [BR:rru03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Rru_A0939    NER (nucleotide excision repair)     GGR (global genome repair) factors      Rru_A0939    MMR (mismatch excision repair)     DNA ligase      Rru_A0939   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Rru_A0939 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT DZR_2 Zn_ribbon_NUD DUF4796_N Motif Other DBs NCBI-ProteinID:  ABC21740 UniProt:  Q2RVV5 LinkDB All DBs Position complement(1118665..1120761) Genome browser AA seq 698 aa AA seqDB search MIPVADLTEAEAARELERLAAEIARHDRLYHQQDAPEITDGEYDALVRRNNEIEAAFPEL VRGDSPSAHVGAAPAEGFAKVTHALPMLSLGNVFSDDEAREFDQRIRRFLSLDGETTISY VAEPKIDGLSFSARYENGVYRRAATRGDGTTGEDITANLATLTDLPQRLTGDGPVPEVLE VRGEVFMTKADFRALNQRQIDAGAKPFANPRNAAAGSLRQLDPEITRSRSLSLFAYASGE VKGLEVESHHAFLERLKTWGFPVNPQTRPCQGVEDLIEATHALALQRAALDYDIDGVVYK VDRVDWQKRLGFVSRAPRWAIARKFPAERAQTTVKAIQIQVGRTGTLTPVAILEPVTVGG VVVGRATLHNEDEIARKDVRIGDMVTIQRAGDVIPQVVEVLLDQRPADSAPFVFPETCPV CGSHAVRQEGEVARRCAGGLICSAQAVERLKHFVSRDAFDIEGLGGKHIETFHNEGLITQ PADIFALEAKDNEPGALQHLRSREGWGPKSAENLFKAITARKTIPLDRFIYALGIRQVGQ ATARLLAGHYASFAAWRKAMDEAQTEGSEAFADLQNIESIGPSVARDLVAFFGEEHNRAA LDALIDAGVEVLDFARPQAAGDSPLAGKTVVFTGTLDTMSRGEAKARALALGAKVTGSVS AKTDYVVVGADAGSKEKKARELGLTVLSEAEFRAMSGG NT seq 2097 nt NT seq  +upstreamnt  +downstreamnt atgattcccgtcgccgatctcaccgaggccgaggccgcccgcgaactcgaacggcttgcc gccgagatcgcccgccacgaccggctctatcaccagcaggacgcgccggaaatcaccgac ggcgagtacgacgccctggtacggcgcaataacgagatcgaggccgccttccccgaactg gtgcgcggcgacagcccctcggcccatgtcggcgccgctccggccgaaggcttcgccaag gtcacccacgccctgccgatgctgtcgctgggcaatgtgttcagcgacgacgaggcccgc gagttcgaccagcgcatccgccgcttcctcagcctggatggcgaaacgacgatcagctat gtcgccgagcccaagatcgatggcctgtcgttttcggcgcgctacgagaacggcgtctat cgccgcgccgccacccggggtgatggcaccaccggcgaggacatcaccgccaatctggcg accctgaccgatctgccccagcgcctgacaggcgacgggcctgtgcccgaggtgctggag gtgcgcggcgaggtgttcatgaccaaggccgatttccgcgccctcaaccaacgccagatc gacgccggcgccaagcccttcgccaatccgcgcaatgcggcggccgggtcgctgcgccag cttgatcccgaaatcacccgctcgcgctcgttgagcctgttcgcctatgcctctggcgag gtcaaggggctggaggtggagagccatcacgcctttctagagcgcctgaaaacctggggg ttcccggtcaatccccaaacccgcccctgccagggggtggaagacctgatcgaagccacc cacgcgttggctttgcaacgggcggcgctggattatgatatcgacggcgtcgtctataag gtcgaccgcgtcgattggcaaaagcgcctgggcttcgtcagccgcgccccgcgctgggcg atcgcccgcaaattccccgccgagcgcgcccaaaccaccgtcaaggccatccagatccag gtcggccgcaccggcaccctgaccccggtcgccattcttgaaccggtcaccgtcggcggc gtcgtcgttggccgggcgacgctgcataacgaggacgagatcgcccgcaaggatgtgcgc atcggcgatatggtcaccatccagcgcgccggcgatgtcattccccaggtggtcgaggtt ctgctcgaccagcgtccggccgatagcgcgccctttgtcttccccgagacctgcccggtc tgcggaagccacgcggtgcgccaagagggcgaggtcgcccggcgctgcgccggcgggctg atctgctcggcccaggcagtcgagcgcctcaagcatttcgtctcgcgcgacgccttcgat atcgaagggctgggcggcaagcatatcgagaccttccataatgagggcctgatcacccaa ccggccgatattttcgcgctggaagccaaggacaacgaacccggcgccttgcagcacctg cgctcgcgcgagggctgggggccgaaatcggcggaaaacctgttcaaggcgatcaccgcc cgcaagaccatccccttggaccgtttcatctacgccctgggcatccgtcaggttggtcag gccaccgcccgcctgctcgccggtcattacgccagcttcgccgcctggcgcaaggcgatg gacgaggcgcaaaccgaaggctccgaagccttcgccgatcttcaaaacatcgaaagcatc ggcccctcggtcgcccgcgaccttgtcgccttttttggcgaagagcataaccgcgcggcc ttggacgccctgatcgacgccggggtcgaggttcttgatttcgcccgcccccaggcggcc ggcgacagcccgctggccggcaagaccgtggttttcaccggcacccttgataccatgagc cggggcgaagccaaggcccgcgccctggcgctcggcgccaaggtcaccggctcggtctcg gccaagaccgattacgtggtggtcggagcggacgccggatccaaggagaagaaggcccgc gaactcggcctgaccgtcctcagcgaggccgagttccgggcgatgagcggtggctga

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