Rhodospirillum rubrum ATCC 11170: Rru_A0955
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Entry
Rru_A0955 CDS
T00310
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00300
Lysine biosynthesis
rru00550
Peptidoglycan biosynthesis
rru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rru_A0955
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rru_A0955
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rru01011
]
Rru_A0955
Enzymes [BR:
rru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Rru_A0955
Peptidoglycan biosynthesis and degradation proteins [BR:
rru01011
]
Precursor biosynthesis
Amino acid ligase
Rru_A0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
ABC21756
UniProt:
Q2RVT9
LinkDB
All DBs
Position
complement(1139948..1141429)
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AA seq
493 aa
AA seq
DB search
MYLDDLIGAVPARAALGGHPGLGGHPGLAIAGLTADSRAVAPGWLFAALPGVKADGRAFI
PAALAAGASAVLAPEGTALPPDAPAALVTAANPRQAFARMAAAFAGAQPATVVAVTGTNG
KTSSVSFTRQIWDRLGRTAASLGTLGAESGVYRRAGSMTTPDPVSLHKMLAEMTEAGVDA
LAMEASSHGLDQYRLDGVRLSAAAFTNLTRDHLDYHHTMDAYLAAKARLFGEVLGREGVA
VLNADDPAFPTLAALCRDRGQSVLDYGRSAKTLRLAGVSAKAHGQSLDLELFGRHHSVLL
PLVGDFQAMNVLCALGLAIATGAPVDAAVATLASLEGVPGRLEMVARRASGAPVYVDYAH
TPDGLVTALRALRPHCRGKLVCVFGCGGDRDRAKRPLMGRAVAEGADVAILTDDNPRSED
PAAIRAEARVGCPDAIEIDGRDAAIRAGVALLGPNDLLVIAGKGHETGQTIGTVVHPFVD
ADHARAAVGEADA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctcgatgatctgatcggcgccgttccggcgcgggccgccctgggcggccaccct
ggcctgggcggccatcctggtttggcgatcgccgggctgacggccgattcccgggcggtg
gcgccgggctggctgttcgccgccctgcccggggtcaaggccgacggccgcgccttcatc
cccgccgccctcgcggccggggcgagcgccgttctggcgcccgagggaacggccctgccc
cctgacgccccggcggcgttggtcaccgcggccaatccccgccaggccttcgcccgcatg
gccgccgccttcgccggcgcccaaccggccacggtggtggcggtgaccggtaccaacggc
aagacctcgagcgtcagcttcacccgtcagatctgggaccgcctggggcggacggcggcc
agcctggggacgctcggcgccgaaagcggcgtttatcggcgggccggcagcatgaccacc
cccgatccggtgtctttgcacaaaatgctggccgagatgaccgaagccggggtcgacgcc
ctggcgatggaggcctcgtcccatggcctggatcaataccgccttgacggcgtgcgcctg
agtgctgccgccttcaccaatctgacccgcgaccatctcgactatcaccacaccatggac
gcctatctggcggccaaggcccggctgtttggcgaggttctggggcgcgagggtgtggcc
gtgctcaatgccgacgatccggcgttccccaccctggccgcgctctgccgcgaccgaggc
caaagcgtgcttgattacggccggagcgccaagaccctgcgccttgccggcgtcagcgcc
aaggcccatggccagagcctggacctcgagctttttggccggcaccatagcgtgctgttg
cccttggtcggcgatttccaggcgatgaacgtgctctgcgccctgggactggcgatcgcc
accggcgcgccggtcgacgccgccgtggcgaccctggccagcctggaaggcgtgccgggc
cgcttggagatggtggcgcggcgggcctcgggcgccccggtctacgtcgattacgcccat
actcccgacggtctggtcaccgccttgcgggccctgcgcccccattgccggggcaagctg
gtctgcgttttcggctgcggcggcgaccgcgaccgcgccaaacggccgctgatgggccgc
gccgtggccgagggcgccgatgtggcgatcctgaccgatgacaatccgcgcagcgaggat
ccggccgccatccgcgccgaagcccgcgttggctgccccgacgcgatcgagatcgacggc
cgcgacgccgccatccgcgcaggcgtcgccctgcttggaccaaacgacctgctggtgatc
gccggcaagggccatgaaaccggccagaccatcggcaccgtggttcatcccttcgtcgat
gccgatcacgcccgcgccgccgttggggaggccgacgcatga
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