Rathayibacter rathayi: C1O28_00080
Help
Entry
C1O28_00080 CDS
T05845
Symbol
vanA
Name
(GenBank) D-alanine--(R)-lactate ligase
KO
K15739
D-alanine---(R)-lactate ligase [EC:
6.1.2.1
]
Organism
rry
Rathayibacter rathayi
Pathway
rry01502
Vancomycin resistance
rry02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C1O28_00080 (vanA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
C1O28_00080 (vanA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rry01504
]
C1O28_00080 (vanA)
Enzymes [BR:
rry01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.2 acid-alcohol ligases (ester synthases)
6.1.2.1 D-alanine---(R)-lactate ligase
C1O28_00080 (vanA)
Antimicrobial resistance genes [BR:
rry01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
C1O28_00080 (vanA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
GARS_A
PRODH
Motif
Other DBs
NCBI-ProteinID:
AZZ47788
UniProt:
A0ABD6W626
LinkDB
All DBs
Position
complement(12667..13698)
Genome browser
AA seq
343 aa
AA seq
DB search
MSKTTIAVLFGGCSEEHDVSVKSAIEIAGALDPERYDALWIGITRRGEWRLCEGPRPDWE
SQHGRAAVISPDRGTHGLLVEDEGTFRRVGVDVVLPVLHGTGGEDGSIQGLLELSGLPYV
GCDIQGSVVCMDKSLAYTVAAQAGIPVPAFTVVHPGERVDVDTLSFPVFVKPARSGSSFG
VTKVESAQRLDEAITLARRYDQKVLIEEQVLGSEVGCAVLGDGDDLVVGEVDQIRLEHGL
FRIHQEAEPEKGSLNSSITVPAGLPEAQRTEIQERAKALYRALGCRGLARVDLFLLEDGR
VVLNEVNTLPGFTSYSRYPRMMAAAGLSVSDLIDRSVQLAMTR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagacgaccatcgccgtcctgttcggcggctgctccgaggagcacgacgtctcc
gtcaaatccgcgatcgagatcgccggagcactggacccggaaaggtacgacgccctctgg
atcgggatcacccgccgcggcgagtggcggctctgcgagggcccgcgccccgactgggag
tcgcagcacggccgtgccgcggtgatctcccccgaccgcgggacccacggcctcctggtc
gaagacgagggcaccttccgtcgggtcggagtcgatgtcgtcctccccgtcctgcacggc
accggaggcgaggacggctccatccagggcctgctcgaactctccggcctgccgtacgtc
ggctgtgacatccagggatcggtggtgtgcatggacaagtcgctcgcgtacaccgtcgcg
gcgcaggccgggatccccgtgccggcgttcaccgtcgtgcacccgggggagcgcgtcgat
gtggacaccctgagcttccccgtcttcgtgaagccggcgcgctcgggttcgtcgttcgga
gtcacgaaggtcgagtccgcccagcggctcgacgaggcgatcaccctcgcccgccggtac
gaccagaaggtgctgatcgaggagcaggtgctcggctcggaggtgggctgcgccgtcctc
ggcgacggagacgacctggtcgtcggcgaggtggaccagatccgcctggagcacgggctc
ttccgcatccaccaggaggcggagccggagaaggggtcgctcaactcctccatcaccgtc
ccggccggcctccccgaggcgcagcggacggagattcaggagcgggcgaaggcgctctac
cgggcgctcggctgccgggggctggcccgcgtcgacctgttcctgctcgaggacgggcgc
gtggtcctgaacgaggtcaacaccctgcccgggttcacctcgtacagccggtacccccgg
atgatggccgccgccggcctcagcgtctccgatctgatcgaccgcagcgttcagctggcg
atgacccgatga
DBGET
integrated database retrieval system
