Rhodococcus ruber: CS378_03425
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Entry
CS378_03425 CDS
T05142
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00270
Cysteine and methionine metabolism
rrz00450
Selenocompound metabolism
rrz00670
One carbon pool by folate
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01230
Biosynthesis of amino acids
rrz04980
Cobalamin transport and metabolism
rrz04981
Folate transport and metabolism
Module
rrz_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CS378_03425 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CS378_03425 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CS378_03425 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CS378_03425 (metH)
04980 Cobalamin transport and metabolism
CS378_03425 (metH)
Enzymes [BR:
rrz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
CS378_03425 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
ATQ27875
UniProt:
A0A098BDT4
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All DBs
Position
738854..742423
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AA seq
1189 aa
AA seq
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MSTPLHSALLDALSQRVVVGDGAMGTMLQAADLSLDDFRGLEGCNEILNDSRPDVIRGIH
RAYFEAGADAVSTNTFGCNLPNLADYDIADRIRDLSERGARLAREVADEMGPGPDGMGRF
VLGSMGPGTKLPTLGHAPFAVLRDAYTESALGMLDGGADAILVETCQDLLQAKAAIVGSR
RAMERSGRRIPIVTHVTVETTGTMLLGSEIGAALTALEPLGIDLIGLNCATGPEEMSEHL
RHLSKHARLPVSVMPNAGLPVLGANGAEYPLTPEELAQALSGFVAEFGLALVGGCCGTTP
EHIRQVAEAVRETERAERAPRPEPGVSSLYSAVPFEQDSSILMIGERTNSNGSKAFREAM
LAGDHQKCLDIAKDQIRDGAHLLDLNVDYVGRDGAADMADLASRLATASTLPIMIDSTEP
DVIRAGLEHLGGRCAVNSVNYEDGDGPGSRFERIMQHVVEHGAAVVALTIDEEGQARTAE
HKVRIAERLIADLTGNWGLGEEDIVVDALTFPISTGQEEVRRDAIETIEAIREIKRRHPR
VHFTLGISNVSFGLNPAARQVLNSVFLHECVQAGLDTAIVHASKILPMARIPDEQRETAL
DLVYDRRREGYDPLQKLMALFEGVSAASSRESRAQELAALPLFERLERRIVDGERNGLEA
DLDEAMQTTPPLAIINDTLLSGMKTVGELFGSGQMQLPFVLQSAEVMKAAVAYLEPHMES
TGDEGKGRIVLATVKGDVHDIGKNLVDIILSNNGYEVVNLGIKQPIATILDAAVDKNADV
IGMSGLLVKSTVVMKENLEELNHRGVAQRFPVLLGGAALTRSYVENDLAEIYDGEVSYAR
DAFEGLHLMDRVMAVKRGEGPAPDSPEAVAAKEKAAERKARHERSKRIAEKRKAAETPVE
VPERSDVAADLEVPTPPFWGTRVVKGVALADYAGLIDERALFLGQWGLRGQRTGDGPTYE
ELVESEGRPRLRYWLDRLSTEGILAHAAVVYGYFPAVSEGDDVVVLAEPHPDAAERYRFT
YPRQQRGRFLCIADFVRSRADARAKGQVDVLPFQLVTMGQPIADFANELFAANSYRDYLE
VHGIGVQLTEALAEYWHRRVREELVLAGGHNLAEEDPADVAEFFKLGYRGARFAFGYGAC
PNLEDRIKLVELLEPDRIGVELSEELQLHPEQSTDAFVLHHPEAKYFNV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccattgcactctgccttgctcgatgcgctctcgcagcgcgttgtcgtggga
gacggggcgatgggcacgatgttgcaggccgcggatctgagtctggacgacttccgcggc
ctcgaggggtgcaacgagattctcaacgactcccggcccgacgtcatccggggaatccac
cgggcgtacttcgaggcgggagcggatgccgtttccaccaacaccttcggttgcaacctg
cccaacctcgccgactacgacatcgccgatcgcatccgggacctgtccgaacgcggcgcc
cgcctggcccgggaggtggccgacgagatgggtcccggcccggacggcatgggacggttc
gtgctgggctcgatgggtccgggcacgaagctgcccaccctcggtcatgccccgttcgcc
gtgttgcgtgacgcctacaccgagtccgcgctgggcatgctcgacggcggcgccgacgcc
atcctcgtcgagacctgccaggacctgctgcaggcgaaggccgcgatcgtcggtagccgc
cgcgcgatggagcggtccgggcggcgcattccgatcgtcacccacgtgacggtggagacg
accggcacgatgctgctcggcagcgagatcggggcggccctgacggcgctcgagccgctg
ggcatcgacctgatcgggctgaactgtgccaccggcccggaggagatgagcgagcacctg
cggcatctgtccaagcatgcccggctgccggtgtcggtgatgccgaacgcgggcctgccg
gtgctcggggccaacggcgccgagtacccgttgaccccggaggaactggcgcaggcgctc
agcgggttcgtcgccgagttcgggctggcgctggtcggcggctgctgcggcaccaccccc
gagcacatccggcaggtcgccgaggcggtgcgcgagaccgagcgcgccgaacgcgctccc
cggccggagccgggcgtgtcgtcgttgtactcggcggtaccgttcgagcaggactcgtcg
atcctgatgatcggcgagcgcaccaattcgaacgggtcgaaggcgttccgggaggcgatg
ctcgccggggatcatcagaagtgcctggacatcgcgaaggatcagatccgcgacggcgcg
cacctgctggatctgaacgtggactacgtgggccgcgacggcgccgccgacatggcggat
ctggcgagccggctggcgacggcgtcgacgttgccgatcatgatcgattcgacggagccg
gacgtgatccgggccggtctcgagcatctcgggggccggtgcgcggtgaactcggtgaac
tacgaggacggcgacggcccgggttcgcggttcgaacggatcatgcagcacgtggtcgag
cacggtgccgcggtggtcgcgttgacgatcgacgaggagggtcaggcgcgtaccgccgag
cacaaggtgcgcatcgccgagcggctgatcgcggatctgaccggcaactggggcctcggc
gaggaggacatcgtcgtcgacgccctgacgttcccgatctccaccgggcaggaggaggtc
cgccgggacgccatcgagacgatcgaggcgatccgcgagatcaagcgccggcatccgcgg
gtgcacttcaccctgggcatctcgaacgtgtcgttcggactgaacccggcggcgcggcag
gtgctgaactcggtgttcctgcacgagtgtgtgcaggcggggctggacacggcgatcgtg
cacgcgtcgaagatcctgccgatggcgcggatcccggacgagcagcgcgagacggcgctg
gacctggtgtacgaccggcggcgcgagggatacgacccgctgcagaagctgatggcgctg
ttcgaaggggtgtcggcggcgtcgtcgcgcgagtcccgcgcgcaggagctcgctgcgctg
ccgctgttcgagcggctcgagcggcggatcgtcgacggcgagcgcaacgggctcgaggcg
gatctggacgaggcgatgcagacgacgccgccgctggcgatcatcaatgacacgctgctg
tcggggatgaagacggtcggggagctgttcggctcggggcagatgcagctgccgttcgtg
ctgcagtccgccgaggtgatgaaggcggcggtggcgtacctcgagccgcacatggagtcc
accggcgacgagggcaagggccggatcgtgctggccaccgtcaagggcgacgtgcacgac
atcggcaagaacctcgtcgacatcatcttgagcaacaacggctacgaggtggtcaacctc
ggcatcaaacagccgatcgcgacgatcctggacgcggccgtggacaagaacgccgacgtg
atcggcatgtccgggctgttggtgaagtcgaccgtggtgatgaaggagaacctcgaggag
ctcaatcaccgcggggtggcgcagcggttcccggtgctgctcggcggtgccgcgctgacc
cgctcgtacgtcgagaacgacctggccgagatctacgacggtgaggtgtcctacgcgcgc
gatgcgttcgaggggctgcatctgatggaccgggtcatggccgtcaagcgcggcgagggc
ccggcgccggacagcccggaggcggtcgcggcgaaggagaaggccgccgagcgcaaggcg
cggcacgagcggtccaagcggatcgcggagaagcgcaaggccgccgagacgccggtggag
gtgccggaacgctccgatgtggccgccgacctcgaggtgcccaccccgccgttctggggc
acccgggtggtcaagggggtggcgctggccgactacgcgggcctgatcgacgagcgggcg
ctgttcctgggacagtgggggctgcgcgggcagcgcaccggggacgggccgacgtacgag
gagctggtggagagcgagggccggccgcggctgcggtactggctcgaccggttgtccacc
gaggggatcctggcgcacgccgccgtggtgtacgggtacttcccggcggtgtcggaaggc
gacgacgtggtggtgctggccgagccgcatccggacgccgccgagcggtaccggttcacc
tatccgcggcagcagcgcggccggttcctgtgcatcgccgacttcgtgcggtcgcgggcg
gacgcgcgggcgaaggggcaggtggacgtgctgccgttccagctggtgacgatggggcag
ccgatcgcggacttcgcgaacgagttgttcgcggcgaactcctaccgggactacctggag
gtgcacggcatcggcgtgcagctgaccgaggcgctggccgagtactggcaccggcgggtc
cgggaggagctggtgctcgccggcggtcacaacctggccgaggaggatccggcggacgtg
gccgagttcttcaagctgggctaccgcggggcgcggttcgcgttcgggtacggggcgtgc
ccgaacctcgaggaccgcatcaagctggtcgagttgctcgagccggaccggatcggggtg
gagctgtcggaggagctgcagctgcatccggaacagtccaccgacgcgttcgtcctgcat
cacccggaggcgaagtacttcaatgtctag
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