Rhodococcus ruber: CS378_04940
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Entry
CS378_04940 CDS
T05142
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CS378_04940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rrz01007
]
CS378_04940
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrz03016
]
CS378_04940
Enzymes [BR:
rrz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
CS378_04940
Amino acid related enzymes [BR:
rrz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CS378_04940
Transfer RNA biogenesis [BR:
rrz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CS378_04940
Prokaryotic type
Other AARSs
CS378_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1_2
DUF6128
Motif
Other DBs
NCBI-ProteinID:
ATQ28137
LinkDB
All DBs
Position
complement(1114119..1117271)
Genome browser
AA seq
1050 aa
AA seq
DB search
MTKSTPDTPQAPVASTGKYPLVDYGVAKDSGVDFPELEVEVLDGWTKDDTFRASVSNRDG
AEEFVFYDGPPFANGLPHYGHLLTGYVKDLIPRFQTMRGKKVERRFGWDCHGLPAELEAE
KQLGITDKSQIDTMGLAEFNAYCKTSVLRYTGEWRDYVTRQARWVDFDNDYKTLDLDFME
SVMWAFKRLYDKGLIYQGFRVLPYSWYEQTPLSNQETRLDDAYKMRQDPAVTVDMVLRAP
GSELDGACALIWTTTPWTLPSNLAIAVHPDIEYVGVRGADGKTYVLAQERVGHYARELGD
EPEVLGRYSGADLVGLAYEPPFDFFVGRENAHRIIAADYVTTDSGTGIVHLAPAFGEEDM
EYCQRNGIELVQPLDPGGKFTAMVPPYEGLQVFDANPVIIKDLKAAGKLLRHETIEHSYP
HSWRSGQPLIYMAVPSWFVAVTQFRDRMVELNKQITWVPEHIRDGQFGKWLEGARDWNIS
RNRYWGSPIPVWVSDDPAYPRIDVYGSLDELERDFGVRPADLHRPMIDELTRPNPDDPTG
TSTMRRVPEVLDCWFESGSMPFAQVHYPFENQGWFDSHYPGDFIVEYNGQTRGWFYTLHV
LATALFDRPAFKTVAAHGIVLGDDGLKMSKSKGNYPDVNEVFARDGSDAMRWFLMSSPIL
RGGNLVVTEQGIREGVRQALLPLWNAWSFLQLYASEPGTWRTDSPHVLDRYILAKLAATR
DAITDALEVVDIAGACDELRTFCDALTNWYVRRSRSRFWDEDADAIDTLHTVLEVVSRLA
APLLPLVTEVIWRGLTGGRSVHLADWPAAGELPADPALVESMDEVRAVCSTVLSLRKAQK
LRVRLPLPQVTVAAPDAHRLQPFADLVQDEVNVKSVELTDDVDAHGRFELVVNARAAGPR
LGKDVQTVIKAVKAGDWSEADDGTVTAAGIALLPEEYTTRLVAAEPESTAALPGGAGLVV
LDSTVTEELEAEGWAKDRIRELQDARRNLGLEVSDRIGVVFEVPADRADWAMRHRALIAS
EVLATSFELAPAGDGALELGEGVRAAIVKA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaagagcacccccgacaccccgcaggccccggtcgcgtcgaccggcaagtacccg
ctcgtcgactacggggtggccaaggattcgggcgtcgatttccccgagctcgaggtcgag
gtcctcgacgggtggaccaaggacgacaccttccgcgcctcggtgtcgaaccgcgacggc
gccgaggaattcgtcttctacgacggcccgcccttcgcgaatggtctgccgcactacggc
cacctgctcaccggttacgtcaaggacctgatcccgcgcttccagacgatgcgcgggaag
aaggtcgagcggcgcttcggctgggactgtcacggcctgcccgccgagctcgaggcggag
aagcagctcggcatcacggacaagtcccagatcgacacgatgggactcgccgagttcaac
gcctactgcaagacgtcggtgctgcggtacaccggggagtggcgcgactacgtcacccgg
caggcccgctgggtggacttcgacaacgactacaagaccctggacctggacttcatggag
tcggtcatgtgggccttcaagcggctctacgacaagggcctgatctaccagggcttccgg
gtgctgccctactcgtggtacgagcagaccccgctgtcgaaccaggagacccggctcgac
gacgcgtacaagatgcgccaggacccggcggtgaccgtggacatggtgctgcgcgccccc
ggctccgagctcgacggcgcgtgcgcgctgatctggaccaccacgccgtggaccctgccg
tccaacctcgcgatcgcggtgcatcccgacatcgagtacgtcggcgtgcgcggcgccgac
ggcaagacctacgtgctcgcgcaggagcgggtcggtcactacgcgcgcgaactcggtgac
gaacccgaggtgctcggccgctattccggcgccgacctcgtgggtctggcctacgagccg
ccgttcgacttcttcgtgggccgcgagaacgcccaccggatcatcgccgccgactatgtc
accaccgactccggcaccggaatcgtgcacttggcaccggctttcggtgaagaagacatg
gagtactgccagcgcaacggcatcgaactggtgcagccgctcgatccgggcgggaagttc
accgcgatggtcccgccctacgaggggctgcaggtcttcgacgccaacccggtgatcatc
aaggacctcaaggccgccgggaagctgttgcggcacgagacgatcgagcactcctacccg
cactcgtggcggtccgggcaaccgctgatctacatggcggtgccgtcgtggttcgtcgcc
gtcacccagttccgggaccgcatggtggagttgaacaagcagatcacctgggtgcccgag
cacatccgcgacggacagttcggcaagtggctcgaaggtgcccgcgactggaacatcagc
cggaaccgctactggggcagcccgattccggtgtgggtctcggacgacccggcctacccg
cggatcgacgtctacggctccctcgacgaactcgaacgcgacttcggggtgcgcccggcc
gacctgcaccggccgatgatcgacgagctgacccggcccaacccggacgacccgaccggg
acgtcgacgatgcgccgcgtgcccgaggtgctcgactgctggttcgagtcgggctcgatg
ccgttcgcgcaggtgcactacccgttcgagaatcaggggtggttcgactcccactatccg
ggcgatttcatcgtcgagtacaacgggcagacccgcggctggttctacaccctgcacgtg
ctggccaccgcgctgttcgaccggcccgccttcaagaccgtcgcggcgcacggcatcgtg
ctcggcgacgacgggctgaagatgagcaagtccaagggcaactaccccgatgtcaacgag
gtgttcgcccgcgacggctccgatgccatgcgctggttcctgatgtcctcgcccatcctg
cgcggcggcaacctcgtcgtcaccgagcagggcatccgcgagggtgtccggcaggcgctg
ctgccgctgtggaacgcgtggagcttcctgcagctgtacgcgtccgagcccggcacctgg
cgcaccgactcgccgcacgtgctcgaccggtacatcctggccaagctcgctgccacccgc
gacgcgatcaccgacgccctcgaggtggtcgacatcgccggggcctgcgacgagctgcgc
acgttctgcgacgccctcaccaactggtacgtgcgccgctcccgcagccggttctgggac
gaggacgccgacgcgatcgacaccctgcacaccgtgctcgaggtcgtcagccgcctggcg
gccccgctgctgccgctggtcaccgaggtgatctggcggggcctgaccggcggtcgctcc
gtgcatctggcggactggccggcggccggggagctgccggccgacccggccctggtcgag
tcgatggacgaggtccgcgcggtgtgctcgacggtgctctcgctgcgcaaggcccagaag
ctgcgcgtgcggctgccgctcccgcaggtcaccgtggccgcccccgacgcccaccggctg
cagccgttcgccgatctcgtccaggacgaggtgaacgtgaagtcggtcgagctgaccgac
gacgtcgatgcgcacgggcgcttcgaactggtcgtcaacgcccgcgccgcggggccgcgc
ctcggcaaggacgtgcagacggtcatcaaggcggtcaaggccggggactggtcggaggcg
gacgacggcaccgtcaccgccgccggcatcgccctgctgccggaggagtacaccacgcgc
ttggtggcggcggagccggagtccacggcggcgctgcccggcggcgccggcctggtggtg
ctggactccacggtcaccgaggagctcgaggccgagggctgggcgaaggaccggatccgc
gagctgcaggacgcgcgccgcaacctgggcttggaggtctcggaccgcatcggcgtggtg
ttcgaggtgccggccgaccgcgccgactgggcgatgcggcaccgcgcgctcatcgcctcg
gaggtgctggccaccagcttcgaactggcacccgccggcgacggggcgctcgagctcggc
gaaggggtgcgtgcggcgatcgtcaaggcatga
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